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系统分析 microRNAs 在种公鸡出生后肝成熟和羽化中的调控作用。

Systematic analysis of the regulatory roles of microRNAs in postnatal maturation and metergasis of liver of breeder cocks.

机构信息

College of Animal Science and Technology, Northwest A&F University, Yangling, 712100, Shaanxi, China.

Dazhou Institute of Agricultural Sciences, Dazhou, 635000, Sichuan, China.

出版信息

Sci Rep. 2018 Jan 8;8(1):61. doi: 10.1038/s41598-017-18674-3.

Abstract

The liver function of chickens is intensively remodeled from birth to adult, which was validated by metabolomics research in the present study. In order to understand the roles of microRNAs (miRNA) in liver maturation and metergasis, miRNA expression profiles in livers of 20 male chicks aged one day and five adult cocks aged 35 weeks were determined. A total of 191 differentially expressed miRNAs with the criteria of P < 0.05 and fold changes either >1.5 or <0.67 and 32 differentially expressed miRNAs with the criteria of false discovery value (FDR) < 0.05 and fold changes either >1.5 or <0.67 were detected. Subsequently, Gene Ontology and Kyoto Encyclopedia of Genes and Genomes analyses of the targets revealed that candidate miRNAs may involve in the regulation of hepatic metabolism and immune functions, and some pathways including cell cycle which were implicated in postnatal liver development. Furthermore, 1211 differentially expressed mRNAs (messenger RNA) in livers between the postnatal and matured chickens were used to define the roles of differentially expressed miRNAs in regulating the expression of target genes. Our results revealed the first miRNA profile related to the adaption of mature liver functions after birth in breeder cock.

摘要

本研究通过代谢组学研究证实,鸡的肝功能从出生到成年会进行集中重塑。为了了解 microRNA(miRNA)在肝脏成熟和代谢中的作用,我们测定了 20 只 1 日龄雄性小鸡和 35 周龄 5 只成年公鸡肝脏中的 miRNA 表达谱。根据 P 值<0.05、倍数变化>1.5 或<0.67 的标准,共检测到 191 个差异表达的 miRNA;根据 FDR 值<0.05、倍数变化>1.5 或<0.67 的标准,共检测到 32 个差异表达的 miRNA。随后,对靶基因的基因本体论和京都基因与基因组百科全书分析表明,候选 miRNA 可能参与了肝脏代谢和免疫功能的调节,一些途径,包括细胞周期,与出生后肝脏发育有关。此外,在出生后和成熟鸡的肝脏之间,还检测到 1211 个差异表达的信使 RNA(mRNA),用于定义差异表达的 miRNA 在调节靶基因表达中的作用。我们的研究结果揭示了在种公鸡中与成熟肝脏功能适应相关的第一个 miRNA 图谱。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e5b4/5758705/9d1ddec0d1e4/41598_2017_18674_Fig1_HTML.jpg

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