Vetter Melanie, Boegholm Niels, Christensen Anni, Bhogaraju Sagar, Andersen Marie B, Lorentzen Anna, Lorentzen Esben
Department of Structural Cell Biology, Max-Planck-Institute of Biochemistry, Martinsried, D-82152, Germany.
Department of Molecular Biology and Genetics, Aarhus University, Aarhus C, DK-8000, Denmark.
Proteins. 2018 Apr;86(4):405-413. doi: 10.1002/prot.25455. Epub 2018 Jan 29.
Rab GTPases and their effectors, activators and guanine nucleotide exchange factors (GEFs) are essential for vesicular transport. Rab8 and its GEF Rabin8 function in formation of the cilium organelle important for developmental signaling and sensory reception. Here, we show by size exclusion chromatography and analytical ultracentrifugation that Rabin8 exists in equilibrium between dimers and tetramers. The crystal structure of tetrameric Rabin8 GEF domain reveals an occluded Rab8 binding site suggesting that this oligomer is enzymatically inactive, a notion we verify experimentally using Rabin8/Rab8 GEF assays. We outline a procedure for the purification of active dimeric Rabin8 GEF-domain for in vitro activity assays.
Rab GTP酶及其效应蛋白、激活蛋白和鸟嘌呤核苷酸交换因子(GEF)对于囊泡运输至关重要。Rab8及其GEF Rabin8在对发育信号传导和感觉接收很重要的纤毛细胞器形成过程中发挥作用。在这里,我们通过尺寸排阻色谱法和分析超速离心法表明,Rabin8以二聚体和四聚体之间的平衡状态存在。四聚体Rabin8 GEF结构域的晶体结构揭示了一个封闭的Rab8结合位点,这表明该寡聚体在酶学上是无活性的,我们通过Rabin8/Rab8 GEF测定实验验证了这一观点。我们概述了一种用于纯化活性二聚体Rabin8 GEF结构域以进行体外活性测定的方法。