Univ. Lille, CNRS, UMR 8576 - UGSF - Unité de Glycobiologie Structurale et Fonctionnelle, F-59000 Lille, France.
Proteomics Platform, Institut de Génétique et de Biologie Moléculaire et Cellulaire (IGBMC), INSERM U964, CNRS UMR7104, Strasbourg University, Illkirch, France.
Biochim Biophys Acta Gen Subj. 2018 Apr;1862(4):825-835. doi: 10.1016/j.bbagen.2018.01.007. Epub 2018 Jan 11.
Lamin B Receptor (LBR) is an integral protein of the interphase inner nuclear membrane that is implicated in chromatin anchorage to the nuclear envelope. Phosphorylation of a stretch of arginine-serine (RS) dipeptides in the amino-terminal nucleoplasmic domain of LBR regulates the interactions of the receptor with other nuclear proteins, DNA and RNA and thus modulates tethering of heterochromatin to the nuclear envelope. While phosphorylation has been extensively studied, very little is known about other post-translational modifications of the protein. There is only one report on the O-β-linked N-acetyl-glucosaminylation (O-GlcNAcylation) of a serine residue downstream of the RS domain of rat LBR. In the present study we identify additional O-GlcNAcylation sites by using as substrates of O-β-N-acetylglucosaminyltransferase (OGT) a set of peptides containing the entire LBR RS domain or parts of it as well as flanking sequences. The in vitro activity of OGT was assessed by tandem mass spectrometry and NMR spectroscopy. Furthermore, we provide evidence that O-GlcNAcylation hampers DNA binding while it marginally affects RS domain phosphorylation mediated by SRPK1, Akt2 and cdk1 kinases.
Our methodology providing a quantitative description of O-GlcNAc patterns based on a combination of mass spectrometry and high resolution NMR spectroscopy on short peptide substrates allows subsequent functional analyses. Hence, our approach is of general interest to a wide audience of biologists aiming at deciphering the functional role of O-GlcNAc glycosylation and its crosstalk with phosphorylation.
核膜内层的整合蛋白层粘连蛋白 B 受体(LBR)与染色质锚定到核膜有关。LBR 氨基末端核质域中精氨酸-丝氨酸(RS)二肽的伸展磷酸化调节受体与其他核蛋白、DNA 和 RNA 的相互作用,从而调节异染色质与核膜的连接。虽然磷酸化已被广泛研究,但对蛋白质的其他翻译后修饰知之甚少。只有一份关于大鼠 LBR RS 域下游丝氨酸残基的 O-β-连接 N-乙酰葡萄糖胺化(O-GlcNAcylation)的报告。在本研究中,我们通过使用一组包含整个 LBR RS 域或其部分以及侧翼序列的肽作为 O-β-N-乙酰葡萄糖胺基转移酶(OGT)的底物,鉴定了其他 O-GlcNAcylation 位点。OGT 的体外活性通过串联质谱和 NMR 光谱法进行评估。此外,我们提供的证据表明,O-GlcNAcylation 阻碍 DNA 结合,而对由 SRPK1、Akt2 和 cdk1 激酶介导的 RS 域磷酸化的影响较小。
我们的方法提供了一种基于短肽底物的质谱和高分辨率 NMR 光谱学相结合的定量描述 O-GlcNAc 模式的方法,可随后进行功能分析。因此,我们的方法对广大生物学家长达解码 O-GlcNAc 糖基化及其与磷酸化的串扰的功能作用感兴趣。