Division of Biochemical Pharmacology, Department of Pharmaceutical Biosciences, Uppsala University, Box 591, SE-751 24 Uppsala, Sweden.
Arch Biochem Biophys. 2018 Feb 15;640:93-101. doi: 10.1016/j.abb.2017.12.018. Epub 2018 Jan 17.
Pathogenic fungi express fatty acid dioxygenases (DOX) fused to cytochromes P450 with diol or allene oxide synthase activities. The orientation of the fatty acids in the active sites of DOX was investigated with amino acid conjugates of 18:3n-3 and 18:2n-6. 9S-DOX-allene oxide synthase (AOS) oxidized the Gly, Ile, and Trp derivatives at C-9, which suggests that these conjugates enter the substrate recognition site with the omega end in analogy with fatty acids bound to cyclooxygenases and coral 8R-lipoxygenase (8R-LOX). In contrast, 7,8-diol synthases (7,8-LDS), 5,8-LDS, and 8R-DOX-AOS oxidized the Gly conjugates in most case only to small amounts of metabolites, but with retention of hydrogen abstraction at C-8 and relatively minor hydrogen abstraction at C-11. The Ile and Trp conjugates were not oxidized at C-8, and often insignificantly at C-9/C-13. The 8-DOX domains of these enzymes likely position the carboxyl group of substrates at the end of the active site in analogy with plant α-DOX and 9-LOX. Tyr radicals of the 9S-DOX and 8R-DOX domains catalyze antarafacial hydrogen abstraction and oxygen insertion in 18:3n-3. This occurs by abstraction of the proR and proS hydrogens at C-11 and C-8, respectively, in agreement with different "head to tail" orientation in the active site.
致病真菌表达与二醇或烯氧化物合酶活性融合的细胞色素 P450 的脂肪酸双加氧酶 (DOX)。用 18:3n-3 和 18:2n-6 的氨基酸缀合物研究了 DOX 活性位点中脂肪酸的取向。9S-DOX-烯氧化物合酶 (AOS) 在 C-9 氧化 Gly、Ile 和 Trp 衍生物,这表明这些缀合物以 ω 端进入底物识别位点,类似于与环加氧酶和珊瑚 8R-脂氧合酶 (8R-LOX) 结合的脂肪酸。相比之下,7,8-二醇合酶 (7,8-LDS)、5,8-LDS 和 8R-DOX-AOS 在大多数情况下仅氧化 Gly 缀合物生成少量代谢物,但在 C-8 保留氢提取,在 C-11 保留相对较小的氢提取。Ile 和 Trp 缀合物在 C-8 未被氧化,在 C-9/C-13 处通常也不显著。这些酶的 8-DOX 结构域可能将底物的羧基基团定位在活性位点的末端,类似于植物 α-DOX 和 9-LOX。9S-DOX 和 8R-DOX 结构域的 Tyr 自由基催化 18:3n-3 的反式面氢提取和氧插入。这是通过分别在 C-11 和 C-8 提取 proR 和 proS 氢来实现的,与活性位点中不同的“头对头”取向一致。