Department of Biotechnology, Jaypee Institute of Information Technology, Noida 201309, India.
National Institute of Immunology, Aruna Asaf Ali Marg, New Delhi 110067, India.
Int J Biol Macromol. 2018 May;111:1010-1018. doi: 10.1016/j.ijbiomac.2018.01.076. Epub 2018 Jan 31.
Drug resistance to almost all antibiotics of Shigella flexneri, a major cause of shigellosis in developing countries, necessitates continuous discovery of novel therapeutics. This study reports a structure-function analysis of a potential drug target serine acetyltransferase (CysE), an enzyme of de novo cysteine biosynthesis pathway that is absent in humans. Analysis of CysE sequences of S. flexneri species and serotypes displayed only two variants that differed by a single amino acid substitution at position 241. Structural inspection of the available crystal structure disclosed this site to be distinct from the substrate/cofactor binding pockets or dimer/trimer interfaces. This study discovers that V241 variant of S. flexneri CysE has nearly null enzymatic activity. The observation is explained by molecular dynamic studies which reveal that the disorder generated by A241V substitution is the basis of dissociation of the quaternary assembly of S. flexneri CysE leading to loss of enzymatic activity and stability. The study provides the first evidence that position 241 of CysE, affects the catalytic efficiency of enzyme and suggests this locus as a 'hot spot' for the propagation of conformational changes. It may be postulated that transient quaternary structure of CysE maybe another mechanism for regulating the intracellular level of cysteine.
福瑞纳志贺菌(Shigella flexneri)几乎对所有抗生素都具有耐药性,是发展中国家志贺氏菌病的主要病因,因此需要不断发现新的治疗方法。本研究报告了一种潜在药物靶点丝氨酸乙酰转移酶(CysE)的结构-功能分析,该酶是从头合成半胱氨酸途径的一种酶,在人类中不存在。对福瑞纳志贺菌种和血清型的 CysE 序列进行分析,仅发现两个变体,它们在 241 位氨基酸上仅有一个单氨基酸取代的差异。对现有晶体结构的结构检查表明,该位点与底物/辅因子结合口袋或二聚体/三聚体界面不同。本研究发现福瑞纳志贺菌 CysE 的 V241 变体几乎没有酶活性。这一观察结果可以通过分子动力学研究来解释,该研究表明,A241V 取代产生的无序性是导致福瑞纳志贺菌 CysE 四元组装解离的基础,从而导致酶失活和稳定性丧失。该研究首次证明 CysE 的 241 位位置影响酶的催化效率,并表明该位置是构象变化传播的“热点”。可以假设 CysE 的瞬态四级结构可能是另一种调节细胞内半胱氨酸水平的机制。