Laboratoire d'Ecologie Microbienne, UMR5557, CNRS, INRA, VetAgro Sup, UCBL, Université de Lyon, Villeurbanne, 69622, France.
Biométrie et Biologie Evolutive, UMR5558, CNRS, INRIA, VetAgro Sup, HCL, UCBL, Université de Lyon, Villeurbanne, 69622, France.
New Phytol. 2018 Jul;219(1):336-349. doi: 10.1111/nph.14996. Epub 2018 Jan 29.
We investigated whether the diversity, endemicity and specificity of alder symbionts could be changed by isolation in a Mediterranean glacial refugium. We studied both ectomycorrhizal (EM) fungi and nitrogen-fixing actinobacteria associated with alders, and compared their communities in Corsica and on the European continent. Nodules and root tips were sampled on the three alder species present in Corsica and continental France and Italy. Phylogenies based on internal transcribed spacer (ITS) and a multilocus sequence analysis approach were used to characterize fungal and Frankia species, respectively. Patterns of diversity, endemism and specialization were compared between hosts and regions for each symbiont community. In Corsica, communities were not generally richer than on the mainland. The species richness per site depended mainly on host identity: Alnus glutinosa and Alnus cordata hosted richer Frankia and EM communities, respectively. Half of the Frankia species were endemic to Corsica against only 4% of EM species. Corsica is not a hotspot of diversity for all alder symbionts but sustains an increased frequency of poor-dispersers such as hypogeous fungi. Generalist EM fungi and host-dependent profusely sporulating (Sp+) Frankia were abundantly associated with Corsican A. cordata, a pattern related to a more thermophilic and xerophylic climate and to the co-occurrence with other host trees.
我们研究了在地中海冰川避难所隔离是否会改变桤木共生体的多样性、特有性和专化性。我们研究了与桤木有关的外生菌根真菌和固氮放线菌,并比较了它们在科西嘉岛和欧洲大陆的群落。在科西嘉岛和法国、意大利的三种桤木上采样了根瘤和根尖。基于内部转录间隔区 (ITS) 和多位点序列分析方法的系统发育树分别用于表征真菌和弗兰克氏菌的物种。分别比较了每个共生体群落中宿主和区域之间的多样性、特有性和专化性模式。在科西嘉岛,群落通常不如大陆丰富。每个地点的物种丰富度主要取决于宿主的身份:桤木和赤杨分别具有更丰富的弗兰克氏菌和外生菌根真菌群落。一半的弗兰克氏菌物种是科西嘉岛的特有种,而只有 4%的外生菌根真菌物种是特有种。科西嘉岛并不是所有桤木共生体的多样性热点,但它维持着更多传播能力差的物种,如地下真菌。一般的外生菌根真菌和宿主依赖性大量孢子形成(Sp+)的弗兰克氏菌与科西嘉岛的赤杨大量共生,这种模式与更耐热和耐旱的气候以及与其他宿主树种的共存有关。