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糖基取代的二羧酸酯作为提取、过稳定化和膜蛋白结晶的清洁剂。

Glycosyl-Substituted Dicarboxylates as Detergents for the Extraction, Overstabilization, and Crystallization of Membrane Proteins.

机构信息

DPM UMR 5063, Univ Grenoble-Alpes/CNRS, 38041, Grenoble, France.

DRMP group, IBCP UMR 5086 (MMSB), CNRS/Lyon I University, 69367, Lyon, France.

出版信息

Angew Chem Int Ed Engl. 2018 Mar 5;57(11):2948-2952. doi: 10.1002/anie.201713395. Epub 2018 Feb 13.

Abstract

To tackle the problems associated with membrane protein (MP) instability in detergent solutions, we designed a series of glycosyl-substituted dicarboxylate detergents (DCODs) in which we optimized the polar head to clamp the membrane domain by including, on one side, two carboxyl groups that form salt bridges with basic residues abundant at the membrane-cytoplasm interface of MPs and, on the other side, a sugar to form hydrogen bonds. Upon extraction, the DCODs 8 b, 8 c, and 9 b preserved the ATPase function of BmrA, an ATP-binding cassette pump, much more efficiently than reference or recently designed detergents. The DCODs 8 a, 8 b, 8 f, 9 a, and 9 b induced thermal shifts of 20 to 29 °C for BmrA and of 13 to 21 °C for the native version of the G-protein-coupled adenosine receptor A R. Compounds 8 f and 8 g improved the diffraction resolution of BmrA crystals from 6 to 4 Å. DCODs are therefore considered to be promising and powerful tools for the structural biology of MPs.

摘要

为了解决膜蛋白(MP)在去污剂溶液中不稳定的问题,我们设计了一系列糖基取代的二羧酸酯去污剂(DCODs),其中我们优化了极性头部,通过在一侧包含两个与 MPs 质膜-细胞质界面上丰富的碱性残基形成盐桥的羧基,以及在另一侧包含一个糖基以形成氢键,从而夹住膜结构域。在提取后,DCODs 8b、8c 和 9b 比参考或最近设计的去污剂更有效地保留了 BmrA(一种 ATP 结合盒泵)的 ATP 酶功能。DCODs 8a、8b、8f、9a 和 9b 诱导 BmrA 的热位移为 20 至 29°C,而 G 蛋白偶联腺苷受体 A R 的天然版本的热位移为 13 至 21°C。化合物 8f 和 8g 提高了 BmrA 晶体的衍射分辨率从 6 到 4 Å。因此,DCODs 被认为是研究 MPs 结构生物学的有前途和强大的工具。

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