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一个孤立的突尼斯柏柏尔人群的线粒体DNA结构及其与地中海人群的关系。

Mitochondrial DNA structure of an isolated Tunisian Berber population and its relationship with Mediterranean populations.

作者信息

Ben Halim Nizar, Hsouna Sana, Lasram Khaled, Chargui Mariem, Khemira Laaroussi, Saidane Rachid, Abdelhak Sonia, Kefi Rym

机构信息

a Laboratory of Biomedical Genomics and Oncogenetics , Institut Pasteur in Tunis , Tunis , Tunisia.

b University of Tunis El Manar , Tunis , Tunisia.

出版信息

Ann Hum Biol. 2018 Feb;45(1):86-97. doi: 10.1080/03014460.2017.1414875.

Abstract

BACKGROUND

Douiret is an isolated Berber population from South-Eastern Tunisia. The strong geographic and cultural isolation characterising this population might have contributed to remarkable endogamy and consanguinity, which were practiced for several centuries.

AIM

The objective of this study is to evaluate the mitochondrial DNA (mtDNA) genetic structure of Douiret and to compare it to other Mediterranean populations with a special focus on major haplogroup T.

SUBJECTS AND METHODS

Genomic DNA was extracted from blood samples of 58 unrelated individuals collected from the different patrilineal lineages of the population. The hypervariable region 1 of the mtDNA was amplified and sequenced. For comparative analyses, additional HVS1 sequences (n = 4857) were compiled from previous studies.

RESULTS

The maternal background of the studied sample from Douiret was mainly of Eurasian origin (74%) followed by Sub-Saharan (17%) and North African (3%) lineages. Douiret harbours the highest frequency of haplogroup T in the Mediterranean region, assigned to the unique subclade T1a (38%). Phylogenetic analysis showed an outlier position of Douiret at the Mediterranean level.

CONCLUSIONS

The genetic structure of Douiret highlights the presence of founders, most likely of Near/Middle Eastern origin, who conquered this area during the Middle/Late Upper Palaeolithic and Neolithic dispersals.

摘要

背景

杜伊雷是来自突尼斯东南部的一个孤立的柏柏尔人群体。该人群强烈的地理和文化隔离特征可能导致了显著的族内通婚和近亲结婚现象,这种情况持续了几个世纪。

目的

本研究的目的是评估杜伊雷人群的线粒体DNA(mtDNA)遗传结构,并将其与其他地中海人群进行比较,特别关注主要单倍群T。

对象与方法

从该人群不同父系谱系的58名无关个体的血液样本中提取基因组DNA。对mtDNA的高变区1进行扩增和测序。为了进行比较分析,从先前的研究中收集了另外4857条HVS1序列。

结果

来自杜伊雷的研究样本的母系背景主要是欧亚血统(74%),其次是撒哈拉以南血统(17%)和北非血统(3%)。杜伊雷人群拥有地中海地区单倍群T的最高频率,属于独特的亚分支T1a(38%)。系统发育分析表明,杜伊雷在地中海层面处于异常位置。

结论

杜伊雷的遗传结构突出了奠基者的存在,他们很可能来自近东/中东地区,在旧石器时代晚期/新石器时代中期和晚期的扩散过程中征服了该地区。

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