Department of Theoretical Physics, Jožef Stefan Institute, 1000, Ljubljana, Slovenia.
Institute of Physics, University of Belgrade, 11080, Belgrade, Serbia.
Sci Rep. 2018 Jan 31;8(1):1987. doi: 10.1038/s41598-018-20398-x.
Multilevel self-assembly involving small structured groups of nano-particles provides new routes to development of functional materials with a sophisticated architecture. Apart from the inter-particle forces, the geometrical shapes and compatibility of the building blocks are decisive factors. Therefore, a comprehensive understanding of these processes is essential for the design of assemblies of desired properties. Here, we introduce a computational model for cooperative self-assembly with the simultaneous attachment of structured groups of particles, which can be described by simplexes (connected pairs, triangles, tetrahedrons and higher order cliques) to a growing network. The model incorporates geometric rules that provide suitable nesting spaces for the new group and the chemical affinity of the system to accept excess particles. For varying chemical affinity, we grow different classes of assemblies by binding the cliques of distributed sizes. Furthermore, we characterize the emergent structures by metrics of graph theory and algebraic topology of graphs, and 4-point test for the intrinsic hyperbolicity of the networks. Our results show that higher Q-connectedness of the appearing simplicial complexes can arise due to only geometric factors and that it can be efficiently modulated by changing the chemical potential and the polydispersity of the binding simplexes.
涉及纳米粒子小结构群的多层次自组装为具有复杂结构的功能材料的发展提供了新途径。除了颗粒间的相互作用力外,构建块的几何形状和相容性也是决定性因素。因此,全面了解这些过程对于设计具有所需性质的组装体至关重要。在这里,我们引入了一种用于协同自组装的计算模型,其中同时将由单形(连接对、三角形、四面体和更高阶的团)描述的结构化粒子组附着到生长网络上。该模型包含几何规则,为新组提供了合适的嵌套空间,以及系统接受多余粒子的化学亲和力。对于不同的化学亲和力,我们通过结合分布大小的团来生长不同类别的组装体。此外,我们通过图论和图的代数拓扑的度量以及网络的内在双曲性的 4 点测试来表征出现的结构。我们的结果表明,由于仅几何因素,可以出现更高的 Q-连通性的出现的单纯复形,并且可以通过改变化学势和结合单形的多分散性来有效地调节它。