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乙酰化组氨酸b离子结构的表征:恶唑酮与侧链咪唑部分之间的竞争。

Characterization of acetylated histidine b-ion structure: A competition between oxazolone and side chain imidazole moiety.

作者信息

Yadav Kranthikumar, Rao J Laxmikanth, Srinivas R, Nagaraj R, Jagannadham M V

机构信息

1 CSIR-Indian Institute of Chemical Technology, Hyderabad, India.

2 CSIR-Centre for Cellular and Molecular Biology, Hyderabad, India.

出版信息

Eur J Mass Spectrom (Chichester). 2018 Jun;24(3):261-268. doi: 10.1177/1469066718756801. Epub 2018 Feb 2.

Abstract

The detection of post-translational modifications of proteins is an important comprehensive research area. Over the years, proteomic studies involving protein acetylation have attracted a great deal of attention. In the present study, we have focussed on the acetylation of histidine and the intrinsic stability of b-ion of oxazolone ring and/or with side chain imidazole bicyclic product. The formation of oxazolone structure may occur when an amino moiety undergoes acetylation reaction and when it is present in the vicinity of the side chain imidazole moiety. Tryptic peptides generated from the proteins of Acenitobacter radioresistens MMC5-containing N-terminal histidine were explored in a standard proteomic workflow. Formation of [Formula: see text] ion with an oxazolone ring in these peptides has been supported by a tandem mass spectrometric study of a synthetic peptide and density functional theory calculations. The results obtained from this study have implications in understanding the fragmentation of the peptides generated in the proteomic workflows.

摘要

蛋白质翻译后修饰的检测是一个重要的综合研究领域。多年来,涉及蛋白质乙酰化的蛋白质组学研究备受关注。在本研究中,我们聚焦于组氨酸的乙酰化以及恶唑酮环和/或带有侧链咪唑双环产物的b离子的内在稳定性。当氨基部分发生乙酰化反应且其存在于侧链咪唑部分附近时,可能会形成恶唑酮结构。在标准蛋白质组学工作流程中,对来自含N端组氨酸的抗辐射不动杆菌MMC5蛋白质产生的胰蛋白酶肽段进行了研究。对一种合成肽段的串联质谱研究和密度泛函理论计算支持了这些肽段中带有恶唑酮环的[公式:见原文]离子的形成。本研究获得的结果对于理解蛋白质组学工作流程中产生的肽段的碎片化具有重要意义。

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