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两种兼养型金藻的故事:通过基因表达比较洞察两种赭球藻属物种(金藻纲)的代谢

A tale of two mixotrophic chrysophytes: Insights into the metabolisms of two Ochromonas species (Chrysophyceae) through a comparison of gene expression.

作者信息

Lie Alle A Y, Liu Zhenfeng, Terrado Ramon, Tatters Avery O, Heidelberg Karla B, Caron David A

机构信息

Department of Biological Sciences, University of Southern California, Los Angeles, California, United States of America.

出版信息

PLoS One. 2018 Feb 13;13(2):e0192439. doi: 10.1371/journal.pone.0192439. eCollection 2018.

Abstract

Ochromonas spp. strains CCMP1393 and BG-1 are phagotrophic phytoflagellates with different nutritional strategies. Strain CCMP1393 is an obligate phototroph while strain BG-1 readily grows in continuous darkness in the presence of bacterial prey. Growth and gene expression of strain CCMP1393 were investigated under conditions allowing phagotrophic, mixotrophic, or phototrophic nutrition. The availability of light and bacterial prey led to the differential expression of 42% or 45-59% of all genes, respectively. Data from strain CCMP1393 were compared to those from a study conducted previously on strain BG-1, and revealed notable differences in carbon and nitrogen metabolism between the 2 congeners under similar environmental conditions. Strain BG-1 utilized bacterial carbon and amino acids through glycolysis and the tricarboxylic acid cycle, while downregulating light harvesting and carbon fixation in the Calvin cycle when both light and bacteria were available. In contrast, the upregulation of genes related to photosynthesis, light harvesting, chlorophyll synthesis, and carbon fixation in the presence of light and prey for strain CCMP1393 implied that this species is more phototrophic than strain BG-1, and that phagotrophy may have enhanced phototrophy. Cellular chlorophyll a content was also significantly higher in strain CCMP1393 supplied with bacteria compared to those without prey. Our results thus point to very different physiological strategies for mixotrophic nutrition in these closely related chrysophyte species.

摘要

赭球藻属菌株CCMP1393和BG-1是具有不同营养策略的吞噬性植物鞭毛虫。菌株CCMP1393是专性光养生物,而菌株BG-1在有细菌猎物存在的情况下能在持续黑暗中良好生长。在允许吞噬营养、混合营养或光养营养的条件下,对菌株CCMP1393的生长和基因表达进行了研究。光照和细菌猎物的可利用性分别导致所有基因中42%或45 - 59%的基因差异表达。将菌株CCMP1393的数据与之前对菌株BG-1进行的一项研究的数据进行比较,发现在相似环境条件下,这两个同属物种在碳和氮代谢方面存在显著差异。菌株BG-1通过糖酵解和三羧酸循环利用细菌碳和氨基酸,在光照和细菌都存在时下调卡尔文循环中的光捕获和碳固定。相比之下,在有光照和猎物存在时,菌株CCMP1393中与光合作用、光捕获、叶绿素合成和碳固定相关基因的上调表明,该物种比菌株BG-1更具光养性,并且吞噬营养可能增强了光养作用。与没有猎物的情况相比,供给细菌的菌株CCMP1393中的细胞叶绿素a含量也显著更高。因此,我们的结果表明,这些密切相关的金藻物种在混合营养方面具有非常不同的生理策略。

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