State Key Laboratory of Genetic Engineering and Ministry of Education (MOE) Key Laboratory of Contemporary Anthropology, Collaborative Innovation Center of Genetics and Development, School of Life Sciences and Huashan Hospital, Fudan University, Shanghai, 200438 China.
MOE Key Laboratory of Cell Proliferation and Differentiation, School of Life Sciences, Peking University, Beijing, 100871 China.
Genome Res. 2018 Mar 1;28(3):285-294. doi: 10.1101/gr.224451.117.
Cellular senescence has been viewed as a tumor suppression mechanism and also as a contributor to individual aging. Widespread shortening of 3' untranslated regions (3' UTRs) in messenger RNAs (mRNAs) by alternative polyadenylation (APA) has recently been discovered in cancer cells. However, the role of APA in the process of cellular senescence remains elusive. Here, we found that hundreds of genes in senescent cells tended to use distal poly(A) (pA) sites, leading to a global lengthening of 3' UTRs and reduced gene expression. Genes that harbor longer 3' UTRs in senescent cells were enriched in senescence-related pathways. , a member of the Ras superfamily that participates in multiple signal transduction pathways, preferred longer 3' UTR usage and exhibited decreased expression in senescent cells. Depletion of promoted senescence, while rescue of reversed senescence-associated phenotypes. Mechanistically, splicing factor TRA2B bound to a core "AGAA" motif located in the alternative 3' UTR of , thereby reducing the RRAS2 protein level and causing senescence. Both proximal and distal poly(A) signals showed strong sequence conservation, highlighting the vital role of APA regulation during evolution. Our results revealed APA as a novel mechanism in regulating cellular senescence.
细胞衰老一直被视为肿瘤抑制机制,也被认为是个体衰老的原因之一。最近在癌细胞中发现,信使 RNA(mRNA)的 3'非翻译区(3'UTR)通过可变多聚腺苷酸化(APA)广泛缩短。然而,APA 在细胞衰老过程中的作用仍然难以捉摸。在这里,我们发现衰老细胞中的数百个基因往往使用远端多聚腺苷酸化(pA)位点,导致 3'UTR 的全局延长和基因表达的降低。在衰老细胞中具有更长 3'UTR 的基因富集在与衰老相关的途径中。Ras 超家族的成员,参与多种信号转导途径,更喜欢使用更长的 3'UTR,并在衰老细胞中表达降低。消耗 促进衰老,而 的挽救则逆转了与衰老相关的表型。在机制上,剪接因子 TRA2B 与位于替代 3'UTR 中的核心“AGAA”基序结合,从而降低 RRAS2 蛋白水平并导致衰老。近端和远端多聚腺苷酸化信号都显示出很强的序列保守性,突出了 APA 调节在进化过程中的重要作用。我们的结果揭示了 APA 作为一种调节细胞衰老的新机制。