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最常见的线粒体 DNA 突变 (m.3243A>G) 如何从白细胞中消失:数学模型。

How the most common mitochondrial DNA mutation (m.3243A>G) vanishes from leukocytes: a mathematical model.

机构信息

Institut Jacques Monod, Université Paris Diderot, Paris, France.

出版信息

Hum Mol Genet. 2018 May 1;27(9):1565-1571. doi: 10.1093/hmg/ddy063.

DOI:10.1093/hmg/ddy063
PMID:29474538
Abstract

Mitochondrial diseases may be caused by alterations of the mitochondrial genome. The pathogenic variant m.3243A>G is one of the most frequent causes of mitochondrial disease and the most common mitochondrial DNA mutation. Patients with a variant in mitochondrial DNA can have a mixture of mutated and wild-type genomes (heteroplasmy). In the case of the pathogenic variant m.3243A>G, the degree of heteroplasmy (H) correlates to some extent with the severity of the disease. Several longitudinal studies, where H is measured at two different time-points, have shown an annual decline in leukocyte H values. Thus far, only an exponential decay of H with time has been noted but a mechanistic model is lacking. Here, I describe a deterministic mathematical model that accounts for the decline of H in leukocytes based on selective mechanisms acting at the stem cell level. The 'inverted-sigmoid' model provides estimates of at-birth H levels closer to those observed in post-mitotic tissues, such as skeletal muscle, than the estimates provided by an exponential decay. The new model never leads to predictions of H > 100% and provides a stronger correlation between at-birth H values in leukocytes and the scores of the Newcastle Mitochondrial Disease Scale for Adults, which can be of practical utility. This model could be extended to other mitochondrial DNA disease-causing variants.

摘要

线粒体疾病可能由线粒体基因组的改变引起。致病变体 m.3243A>G 是线粒体疾病最常见的原因之一,也是最常见的线粒体 DNA 突变。携带线粒体 DNA 变异的患者可能具有突变型和野生型基因组的混合物(异质性)。在致病变体 m.3243A>G 的情况下,异质性(H)的程度在某种程度上与疾病的严重程度相关。几项纵向研究,在两个不同的时间点测量 H,显示白细胞 H 值的年度下降。到目前为止,仅注意到 H 随时间呈指数衰减,但缺乏机制模型。在这里,我描述了一个确定性的数学模型,该模型基于在干细胞水平起作用的选择机制,解释了白细胞中 H 的下降。“倒钟形”模型提供的出生时 H 水平的估计值更接近在有丝分裂后组织(如骨骼肌)中观察到的水平,而不是指数衰减提供的估计值。新模型从未导致 H>100%的预测,并为白细胞中的出生时 H 值与新堡成人线粒体疾病量表的评分之间提供了更强的相关性,这可能具有实际效用。该模型可以扩展到其他线粒体 DNA 致病变体。

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How the most common mitochondrial DNA mutation (m.3243A>G) vanishes from leukocytes: a mathematical model.最常见的线粒体 DNA 突变 (m.3243A>G) 如何从白细胞中消失:数学模型。
Hum Mol Genet. 2018 May 1;27(9):1565-1571. doi: 10.1093/hmg/ddy063.
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引用本文的文献

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Dynamics of the most common pathogenic mtDNA variant m.3243A > G demonstrate frequency-dependency in blood and positive selection in the germline.最常见的致病性 mtDNA 变体 m.3243A>G 的动态变化在血液中表现出频率依赖性,在生殖系中表现出正选择。
Hum Mol Genet. 2022 Nov 28;31(23):4075-4086. doi: 10.1093/hmg/ddac149.
2
Darwinian selection within an individual or somatic selection: facts and models.个体内的达尔文选择或体细胞选择:事实与模型。
J Mol Cell Biol. 2019 Aug 19;11(8):719-722. doi: 10.1093/jmcb/mjz014.