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渗透剂和拥挤环境对二聚体 LADH 受压诱导解离和失活的影响。

The effects of osmolytes and crowding on the pressure-induced dissociation and inactivation of dimeric LADH.

机构信息

Fakultät Physik/DELTA, TU Dortmund University, 44221 Dortmund, Germany.

出版信息

Phys Chem Chem Phys. 2018 Mar 7;20(10):7093-7104. doi: 10.1039/c7cp08242h.

Abstract

Investigating the correlation between structure and activity of oligomeric enzymes at high pressure is essential for understanding intermolecular interactions and reactivity of proteins in cellulo of organisms thriving at extreme environmental conditions as well as for biotechnological applications, such as high-pressure enzymology. In a combined experimental effort employing small-angle X-ray scattering, FT-IR and fluorescence spectroscopy as well as stopped-flow enzyme kinetics in concert with high-pressure techniques, we reveal the pressure-induced conformational changes of the dimeric enzyme horse liver alcohol dehydrogenase (LADH) on the quaternary, secondary and tertiary structural level. Moreover, the effects of cosolutes and crowding agents, mimicking intracellular conditions, have been addressed. Our results show that beyond an increase of enzymatic activity at low pressures, loss of enzyme activity occurs around 600-800 bar, i.e. in a pressure regime where small conformational changes take place in the coenzyme's binding pocket, only. Whereas higher-order oligomers dissociate at low pressures, subunit dissociation of dimeric LADH takes place, depending on the solution conditions, between 2000 and 4000 bar, only. Oligomerization and subunit dissociation are modulated by cosolvents such as urea or trimethylamine-N-oxide as well as by the crowding agent polyethylene glycol, based on their tendency to bind to the protein's interface or act via their excluded volume effect, respectively.

摘要

研究低聚酶在高压下的结构与活性的相关性,对于理解在极端环境条件下生物体内蛋白质的分子间相互作用和反应性至关重要,也对于高压酶学等生物技术应用具有重要意义。本研究采用小角 X 射线散射、傅里叶变换红外光谱和荧光光谱以及停流酶动力学与高压技术相结合的综合实验方法,揭示了二聚体酶马肝醇脱氢酶(LADH)在四级、二级和三级结构水平上的压力诱导构象变化。此外,还研究了模拟细胞内条件的共溶剂和拥挤剂的影响。研究结果表明,在低压力下酶活性增加的同时,酶活性在 600-800 巴左右会下降,即在辅酶结合口袋中仅发生小的构象变化的压力范围内。虽然高级聚集体在低压力下解离,但取决于溶液条件,二聚体 LADH 的亚基解离仅在 2000-4000 巴之间发生。溶剂如尿素或三甲基氧化胺以及拥挤剂聚乙二醇通过结合到蛋白质界面或通过其排除体积效应来调节寡聚化和亚基解离。

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