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循环肿瘤 DNA 的下一代测序揭示了晚期肝细胞癌的频繁改变。

Next-Generation Sequencing of Circulating Tumor DNA Reveals Frequent Alterations in Advanced Hepatocellular Carcinoma.

机构信息

Center for Personalized Cancer Therapy, Division of Hematology/Oncology, Department of Medicine, University of California San Diego Moores Cancer Center, La Jolla, California, USA.

Tokyo Medical and Dental University, Tokyo, Japan.

出版信息

Oncologist. 2018 May;23(5):586-593. doi: 10.1634/theoncologist.2017-0479. Epub 2018 Feb 27.

DOI:10.1634/theoncologist.2017-0479
PMID:29487225
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5947459/
Abstract

BACKGROUND

Because imaging has a high sensitivity to diagnose hepatocellular carcinoma (HCC) and tissue biopsies carry risks such as bleeding, the latter are often not performed in HCC. Blood-derived circulating tumor DNA (ctDNA) analysis can identify somatic alterations, but its utility has not been characterized in HCC.

MATERIALS AND METHODS

We evaluated 14 patients with advanced HCC (digital ctDNA sequencing [68 genes]). Mutant relative to wild-type allele fraction was calculated.

RESULTS

All patients (100%) had somatic alterations (median = 3 alterations/patient [range, 1-8]); median mutant allele fraction, 0.29% (range, 0.1%-37.77%). Mutations were identified in several genes: (57% of patients), (29%), (7%), (7%), (7%), and (7%); amplifications, in (14%), (14%), (14%), (7%), (7%), (7%), (7%), (7%), and (7%). Eleven patients (79%) had ≥1 theoretically actionable alteration. No two patients had identical genomic portfolios, suggesting the need for customized treatment. A patient with a -inactivating and a -activating mutation received matched treatment: palbociclib (CDK4/6 inhibitor) and celecoxib (COX-2/Wnt inhibitor); des-gamma-carboxy prothrombin level decreased by 84% at 2 months (1,410 to 242 ng/mL [normal: ≤7.4 ng/mL]; alpha fetoprotein [AFP] low at baseline). A patient with a -inactivating and a -activating mutation (an effect suggested by in silico molecular dynamic simulations) received sirolimus (mechanistic target of rapamycin inhibitor) and cabozantinib (MET inhibitor); AFP declined by 63% (8,320 to 3,045 ng/mL [normal: 0-15 ng/mL]).

CONCLUSION

ctDNA derived from noninvasive blood tests can provide exploitable genomic profiles in patients with HCC.

IMPLICATIONS FOR PRACTICE

This study reports that blood-derived circulating tumor DNA can provide therapeutically exploitable genomic profiles in hepatocellular cancer, a malignancy that is known to be difficult to biopsy.

摘要

背景

由于影像学具有很高的灵敏度来诊断肝细胞癌 (HCC),而组织活检存在出血等风险,因此 HCC 通常不进行组织活检。血液衍生的循环肿瘤 DNA (ctDNA) 分析可以识别体细胞改变,但尚未在 HCC 中对其进行特征描述。

材料和方法

我们评估了 14 例晚期 HCC 患者(数字 ctDNA 测序[68 个基因])。计算突变相对于野生型等位基因的比例。

结果

所有患者(100%)均存在体细胞改变(中位数= 3 个/患者[范围 1-8]);中位突变等位基因比例为 0.29%(范围 0.1%-37.77%)。在多个基因中发现了突变:(57%的患者),(29%),(7%),(7%),(7%)和(7%);扩增,在(14%),(14%),(14%),(7%),(7%),(7%),(7%),(7%)和(7%)。11 例(79%)患者存在≥1 种理论上可治疗的改变。没有两个患者具有相同的基因组组合,表明需要定制治疗。一名同时存在 -失活和 -激活突变的患者接受了匹配的治疗:哌柏西利(CDK4/6 抑制剂)和塞来昔布(COX-2/Wnt 抑制剂);2 个月时去甲羧基凝血酶原水平下降 84%(从 1410 降至 242ng/mL[正常值:≤7.4ng/mL];甲胎蛋白[AFP]基线低)。一名同时存在 -失活和 -激活突变的患者(通过计算机分子动力学模拟提示存在这种效果)接受了依维莫司(雷帕霉素靶蛋白抑制剂)和卡博替尼(MET 抑制剂)治疗;AFP 下降 63%(从 8320 降至 3045ng/mL[正常值:0-15ng/mL])。

结论

非侵入性血液检测衍生的 ctDNA 可为 HCC 患者提供可利用的基因组谱。

对实践的意义

本研究报告称,血液衍生的循环肿瘤 DNA 可提供治疗性的基因组谱,用于肝癌,众所周知,肝癌活检难度大。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/92a2/5947459/29abbcdbff8f/onco12404-fig-0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/92a2/5947459/55906518c829/onco12404-fig-0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/92a2/5947459/517512ba3ad9/onco12404-fig-0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/92a2/5947459/6184378ff3e0/onco12404-fig-0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/92a2/5947459/29abbcdbff8f/onco12404-fig-0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/92a2/5947459/55906518c829/onco12404-fig-0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/92a2/5947459/517512ba3ad9/onco12404-fig-0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/92a2/5947459/6184378ff3e0/onco12404-fig-0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/92a2/5947459/29abbcdbff8f/onco12404-fig-0004.jpg

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J Chem Theory Comput. 2013 Sep 10;9(9):3878-88. doi: 10.1021/ct400314y. Epub 2013 Aug 20.
2
PTRAJ and CPPTRAJ: Software for Processing and Analysis of Molecular Dynamics Trajectory Data.PTRAJ和CPPTRAJ:用于处理和分析分子动力学轨迹数据的软件。
J Chem Theory Comput. 2013 Jul 9;9(7):3084-95. doi: 10.1021/ct400341p. Epub 2013 Jun 25.
3
Analytical and Clinical Validation of a Digital Sequencing Panel for Quantitative, Highly Accurate Evaluation of Cell-Free Circulating Tumor DNA.
肝细胞癌中的液体活检:循环肿瘤DNA作为诊断和预后的潜在生物标志物
Curr Oncol Rep. 2025 May 9. doi: 10.1007/s11912-025-01681-3.
4
Precision oncology through next generation sequencing in hepatocellular carcinoma.通过下一代测序实现肝细胞癌的精准肿瘤学
Heliyon. 2025 Jan 17;11(3):e42054. doi: 10.1016/j.heliyon.2025.e42054. eCollection 2025 Feb 15.
5
Liquid biopsy in hepatocellular carcinoma: Challenges, advances, and clinical implications.肝细胞癌中的液体活检:挑战、进展及临床意义
Clin Mol Hepatol. 2025 Feb;31(Suppl):S255-S284. doi: 10.3350/cmh.2024.0541. Epub 2024 Nov 28.
6
Circulating tumor DNA and its role in detection, prognosis and therapeutics of hepatocellular carcinoma.循环肿瘤DNA及其在肝细胞癌检测、预后和治疗中的作用。
Chin J Cancer Res. 2024 Apr 30;36(2):195-214. doi: 10.21147/j.issn.1000-9604.2024.02.07.
7
Existing and emerging biomarkers in hepatocellular carcinoma: relevance in staging, determination of minimal residual disease, and monitoring treatment response: a narrative review.肝细胞癌中现有的和新出现的生物标志物:在分期、微小残留病的确定及治疗反应监测中的相关性:一项叙述性综述
Hepatobiliary Surg Nutr. 2024 Feb 1;13(1):39-55. doi: 10.21037/hbsn-22-526. Epub 2023 May 4.
8
Battle of the biopsies: Role of tissue and liquid biopsy in hepatocellular carcinoma.活检之战:组织活检与液体活检在肝细胞癌中的作用
J Hepatol. 2024 Mar;80(3):515-530. doi: 10.1016/j.jhep.2023.11.030. Epub 2023 Dec 15.
9
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4
Molecular inimitability amongst tumors: implications for precision cancer medicine in the age of personalized oncology.肿瘤之间的分子独特性:对个性化肿瘤学时代精准癌症医学的启示。
Oncotarget. 2015 Oct 20;6(32):32602-9. doi: 10.18632/oncotarget.5289.
5
Breast Cancer Experience of the Molecular Tumor Board at the University of California, San Diego Moores Cancer Center.加利福尼亚大学圣地亚哥分校穆尔斯癌症中心分子肿瘤委员会的乳腺癌治疗经验
J Oncol Pract. 2015 Nov;11(6):442-9. doi: 10.1200/JOP.2015.004127. Epub 2015 Aug 4.
6
Cell-Free DNA Next-Generation Sequencing in Pancreatobiliary Carcinomas.胰腺胆管癌中的游离DNA下一代测序
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8
Actionable mutations in plasma cell-free DNA in patients with advanced cancers referred for experimental targeted therapies.接受实验性靶向治疗的晚期癌症患者血浆游离DNA中的可操作突变。
Oncotarget. 2015 May 20;6(14):12809-21. doi: 10.18632/oncotarget.3373.
9
Exome sequencing of hepatocellular carcinomas identifies new mutational signatures and potential therapeutic targets.肝细胞癌的外显子组测序鉴定出新的突变特征和潜在治疗靶点。
Nat Genet. 2015 May;47(5):505-511. doi: 10.1038/ng.3252. Epub 2015 Mar 30.
10
The history and future of targeting cyclin-dependent kinases in cancer therapy.癌症治疗中靶向细胞周期蛋白依赖性激酶的历史与未来
Nat Rev Drug Discov. 2015 Feb;14(2):130-46. doi: 10.1038/nrd4504.