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小RNA测序的数据挖掘表明前列腺癌与精液和前列腺组织中5'转运RNA半体丰度改变之间存在关联。

Data Mining of Small RNA-Seq Suggests an Association Between Prostate Cancer and Altered Abundance of 5' Transfer RNA Halves in Seminal Fluid and Prostatic Tissues.

作者信息

Dhahbi Joseph M, Atamna Hani, Selth Luke A

机构信息

College of Medicine, California University of Science and Medicine, San Bernardino, CA, USA.

Dame Roma Mitchell Cancer Research Laboratories, Adelaide Medical School, The University of Adelaide, Adelaide, SA, Australia.

出版信息

Biomark Cancer. 2018 Feb 20;10:1179299X18759545. doi: 10.1177/1179299X18759545. eCollection 2018.

DOI:10.1177/1179299X18759545
PMID:29497340
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5824904/
Abstract

Extracellular RNAs are gaining clinical interest as biofluid-based noninvasive markers for diseases, especially cancer. In particular, derivatives of transfer RNA (tRNA) are emerging as a new class of small-noncoding RNAs with high biomarker potential. We and others previously reported alterations in serum levels of specific tRNA halves in disease states including cancer. Here, we explored seminal fluid for tRNA halves as potential markers of prostate cancer. We found that 5' tRNA halves are abundant in seminal fluid and are elevated in prostate cancer relative to noncancer patients. Importantly, most of these tRNA halves are also detectable in prostatic tissues, and a subset were increased in malignant relative to adjacent normal tissue. These findings emphasize the potential of 5' tRNA halves as noninvasive markers for prostate cancer screening and diagnosis and provide leads for future work to elucidate a putative role of the 5' tRNA halves in carcinogenesis.

摘要

细胞外RNA作为基于生物流体的疾病(尤其是癌症)非侵入性标志物正引起临床关注。特别是,转运RNA(tRNA)的衍生物正在成为一类具有高生物标志物潜力的新型小非编码RNA。我们和其他人之前报道了在包括癌症在内的疾病状态下特定tRNA半体血清水平的改变。在这里,我们探索了精液中的tRNA半体作为前列腺癌的潜在标志物。我们发现5' tRNA半体在精液中含量丰富,并且相对于非癌症患者,在前列腺癌中有所升高。重要的是,这些tRNA半体中的大多数在前列腺组织中也可检测到,并且相对于相邻正常组织,一部分在恶性组织中增加。这些发现强调了5' tRNA半体作为前列腺癌筛查和诊断非侵入性标志物的潜力,并为未来阐明5' tRNA半体在致癌作用中假定作用的工作提供了线索。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d205/5824904/21bbfead96a6/10.1177_1179299X18759545-fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d205/5824904/0a65a348a212/10.1177_1179299X18759545-fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d205/5824904/c80d918a9181/10.1177_1179299X18759545-fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d205/5824904/21bbfead96a6/10.1177_1179299X18759545-fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d205/5824904/0a65a348a212/10.1177_1179299X18759545-fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d205/5824904/c80d918a9181/10.1177_1179299X18759545-fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d205/5824904/21bbfead96a6/10.1177_1179299X18759545-fig3.jpg

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本文引用的文献

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DNA Cell Biol. 2017 Feb;36(2):77-94. doi: 10.1089/dna.2016.3426. Epub 2017 Jan 6.
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Gene Expression Differences in Prostate Cancers between Young and Old Men.年轻男性与老年男性前列腺癌中的基因表达差异
PLoS Genet. 2016 Dec 27;12(12):e1006477. doi: 10.1371/journal.pgen.1006477. eCollection 2016 Dec.
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Depletion of tRNA-halves enables effective small RNA sequencing of low-input murine serum samples.
转运RNA衍生的小RNA:新型表观遗传调控因子。
Cancers (Basel). 2020 Sep 27;12(10):2773. doi: 10.3390/cancers12102773.
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The Malignant Role of Exosomes as Nanocarriers of Rare RNA Species.外泌体作为稀有 RNA 物种的纳米载体的恶性作用。
Int J Mol Sci. 2020 Aug 15;21(16):5866. doi: 10.3390/ijms21165866.
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Extracellular tRNAs and tRNA-derived fragments.细胞外 tRNA 及 tRNA 衍生片段。
RNA Biol. 2020 Aug;17(8):1149-1167. doi: 10.1080/15476286.2020.1729584. Epub 2020 Feb 19.
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Profiling of tRNA Halves and YRNA Fragments in Serum and Tissue From Oral Squamous Cell Carcinoma Patients Identify Key Role of 5' tRNA-Val-CAC-2-1 Half.口腔鳞状细胞癌患者血清和组织中tRNA半体及YRNA片段的分析确定了5'tRNA-Val-CAC-2-1半体的关键作用。
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