Semmelweis University, Department of Medical Chemistry, Molecular Biology and Pathobiochemistry, Budapest, Hungary.
Centre for Computational Natural Sciences and Bioinformatics, International Institute of Information Technology, Hyderabad, India.
Plant Physiol Biochem. 2018 May;126:39-46. doi: 10.1016/j.plaphy.2018.02.010. Epub 2018 Feb 19.
Ostreococcus tauri is the smallest free-living unicellular organism with one copy of each core cell cycle genes in its genome. There is a growing interest in this green algae due to its evolutionary origin. Since O. tauri is diverged early in the green lineage, relatively close to the ancestral eukaryotic cell, it might hold a key phylogenetic position in the eukaryotic tree of life. In this study, we focus on the regulatory network of its cell division cycle. We propose a mathematical modelling framework to integrate the existing knowledge of cell cycle network of O. tauri. We observe that feedback loop regulation of both G1/S and G2/M transitions in O. tauri is conserved, which can make the transition bistable. This is essential to make the transition irreversible as shown in other eukaryotic organisms. By performing sequence analysis, we also predict the presence of the Greatwall/PP2A pathway in the cell cycle of O. tauri. Since O. tauri cell cycle machinery is conserved, the exploration of the dynamical characteristic of the cell division cycle will help in further understanding the regulation of cell cycle in higher eukaryotes.
盘基网柄菌是基因组中每种核心细胞周期基因都只有一份拷贝的最小自由生活单细胞生物。由于其进化起源,人们对这种绿藻越来越感兴趣。由于 O. tauri 在绿藻分支中很早就发生了分化,相对接近祖先真核细胞,因此它可能在真核生物生命之树的系统发育中占据关键位置。在这项研究中,我们专注于其细胞分裂周期的调控网络。我们提出了一个数学建模框架来整合 O. tauri 细胞周期网络的现有知识。我们观察到,O. tauri 中 G1/S 和 G2/M 转换的反馈环调节是保守的,这可以使转换双稳态。这对于使转换不可逆至关重要,正如在其他真核生物中所显示的那样。通过进行序列分析,我们还预测了 O. tauri 细胞周期中存在 Greatwall/PP2A 途径。由于 O. tauri 细胞周期机制是保守的,因此探索细胞分裂周期的动态特征将有助于进一步了解高等真核生物中细胞周期的调控。