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药物纳曲酮的新溶剂化物:质子化、构象及合成子的相互作用

New solvates of the drug naltrexone: protonation, conformation and interplay of synthons.

作者信息

Gonçalves Karolina de Oliveira, Ribeiro Leandro, Oliveira Cecilia Maria Alves de, Carvalho Jesiel Freitas, Martins Felipe T

机构信息

Institute of Chemistry, Federal University of Goiás, Goiânia, GO 74001-970, Brazil.

Institute of Physics, Federal University of Goiás, Goiânia, GO 74001-970, Brazil.

出版信息

Acta Crystallogr C Struct Chem. 2018 Mar 1;74(Pt 3):274-282. doi: 10.1107/S2053229618001791. Epub 2018 Feb 6.

Abstract

Naltrexone [systematic name: (4R,4aS,7aR,12bS)-3-cyclopropylmethyl-4a,9-dihydroxy-2,4,5,6,7a,13-hexahydro-1H-4,12-methanobenzofuro[3,2-e]isoquinolin-7-one] is an important morphine-related drug used for combating alcoholism and opioid dependence. Of the eight crystal forms of naltrexone known thus far, only one exists in the neutral form and it crystallizes as a monohydrate. We have isolated the naltrexone free base as two new solvate forms, i.e. the ethyl acetate 0.33-solvate, CHNO·0.33CHO, (I), and the diethyl ether hemisolvate, CHNO·0.5CHO, (II). While just one solvent molecule is present in the asymmetric unit of each solvate, there are three drug molecules (Z' = 3) in ethyl acetate solvate (I) and two (Z' = 2) in diethyl ether solvate (II). In (I), one of the three crystallographically independent drug molecules is present with its cyclopropyl group disordered over two sets of positions, as is the whole diethyl ether solvent molecule in (II). In all known forms, including the title forms, the naltrexone molecule exhibits the same conformation of the fused rings. The only conformational variability of naltrexone is in the cyclopropylmethyl group. Two conformations can be found around the bond connecting this group to the N-heterocycle, which is directly related to drug protonation. We have calculated, at the B3LYP/6-31G** level of theory, the minimum energy conformations of protonated and neutral naltrexone molecules for a chosen torsion angle about this bond. The lowest energy conformers depend on the protonation state and are in agreement with those found in the solid state. Within the cyclopropylmethyl group, the bond joining the methylene C atom to the cyclopropyl fragment also evidences conformational variability. In the literature, there are two well defined conformations around this bond. A third cyclopropyl conformation around this second bond is observed in the title solvates. Concerning the supramolecular features of the previously reported crystal structures, only one classical hydrogen bond between naltrexone molecules and one C(8) homosynthon is known, pointing to the robustness of this synthon and the difficulty in disrupting it. New R(7) and C(10) homosynthons are found in both (I) and (II), suggesting that their occurrence derives from crystallization of the neutral drug from nonpolar solvents.

摘要

纳曲酮[系统名称:(4R,4aS,7aR,12bS)-3-环丙基甲基-4a,9-二羟基-2,4,5,6,7a,13-六氢-1H-4,12-亚甲基苯并呋喃并[3,2-e]异喹啉-7-酮]是一种重要的与吗啡相关的药物,用于治疗酒精中毒和阿片类药物依赖。在迄今为止已知的纳曲酮的八种晶型中,只有一种以中性形式存在,并且它以一水合物形式结晶。我们已经分离出了纳曲酮游离碱的两种新的溶剂化物形式,即乙酸乙酯0.33溶剂化物,CHNO·0.33CHO,(I),和二乙醚半溶剂化物,CHNO·0.5CHO,(II)。虽然每种溶剂化物的不对称单元中仅存在一个溶剂分子,但乙酸乙酯溶剂化物(I)中有三个药物分子(Z' = 3),二乙醚溶剂化物(II)中有两个药物分子(Z' = 2)。在(I)中,三个晶体学独立的药物分子之一的环丙基在两组位置上无序,(II)中的整个二乙醚溶剂分子也是如此。在所有已知形式中,包括标题形式,纳曲酮分子呈现出稠环的相同构象。纳曲酮唯一的构象变化在于环丙基甲基。在连接该基团与N-杂环的键周围可以发现两种构象,这与药物质子化直接相关。我们在B3LYP/6-31G**理论水平上计算了质子化和中性纳曲酮分子围绕该键的选定扭转角的最低能量构象。最低能量构象取决于质子化状态,并且与在固态中发现的构象一致。在环丙基甲基内,连接亚甲基C原子与环丙基片段的键也显示出构象变化。在文献中,围绕该键有两种明确的构象。在标题溶剂化物中观察到围绕该第二个键的第三种环丙基构象。关于先前报道的晶体结构的超分子特征,仅已知纳曲酮分子之间的一个经典氢键和一个C(8)同合成子,这表明该同合成子的稳健性以及破坏它的难度。在(I)和(II)中都发现了新的R(7)和C(10)同合成子,这表明它们的出现源于中性药物从非极性溶剂中的结晶。

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