Guan T, Wu H J, Zhang L J, Xu D J, Zheng L B, Yao Y F
Department of Ophthalmology, Taizhou Municipal Hospital, Taizhou 318000, China.
Zhonghua Yan Ke Za Zhi. 2018 Mar 11;54(3):212-217. doi: 10.3760/cma.j.issn.0412-4081.2018.03.012.
To investigate the possibility of the visual system homeobox 1 (VSX1) gene as a candidate susceptibility gene for Chinese patients with sporadic keratoconus, and to identify sequence variants of the VSX1 gene in such patients. Cross-sectional study. Genomic DNA was extracted from the leukocytes in the peripheral venous blood of 50 patients with sporadic keratoconus and 50 control subjects without this ocular disorder. Five exons and the intron-exon splicing of the VSX1 gene were amplified by polymerase chain reaction (PCR). The PCR products were directly sequenced and compared to the GeneBank database to find mutations. Bioinformatics analysis was done to predict the influence of these mutations on proteins. One novel missense heterozygous mutation (p.R131P) was found in exon 1 of the VSX1 gene in one keratoconus patient. Another heterozygous mutation (p.G160V) in exon 2 was found in two keratoconus patients. These mutations were not detected in the control subjects. Bioinformatics analysis predicted that the p.R131P mutation may not cause a pathogenic change, but the p.G160V mutation might be functionally deleterious. In intron 3 of the VSX1 gene, the nucleotide substitution of g.8326G>A was detected to be heterozygous in 3 cases of sporadic keratoconus and 4 cases of control and homozygous in 2 cases of sporadic keratoconus and 1 case of control. The variation of g.8326G>A belonged to a single polymorphism change of the VSX1 gene. The p.R131P detected in this study is a novel mutation of the VSX1 gene. Sequence variants of the VSX1 gene were identified for the first time in Chinese patients with sporadic keratoconus, but their precise role in disease causation requires further investigations. .
探讨视系统同源框1(VSX1)基因作为中国散发性圆锥角膜患者候选易感基因的可能性,并鉴定该类患者中VSX1基因的序列变异。横断面研究。从50例散发性圆锥角膜患者及50例无眼部疾病的对照者外周静脉血白细胞中提取基因组DNA。通过聚合酶链反应(PCR)扩增VSX1基因的5个外显子及内含子-外显子剪接区。PCR产物直接测序并与基因库数据库比较以发现突变。进行生物信息学分析以预测这些突变对蛋白质的影响。在1例圆锥角膜患者的VSX1基因外显子1中发现1个新的错义杂合突变(p.R131P)。在2例圆锥角膜患者中发现外显子2中的另一个杂合突变(p.G160V)。对照者中未检测到这些突变。生物信息学分析预测p.R131P突变可能不会引起致病改变,但p.G160V突变可能在功能上有害。在VSX1基因内含子3中,检测到g.8326G>A的核苷酸替换在3例散发性圆锥角膜患者和4例对照者中为杂合,在2例散发性圆锥角膜患者和1例对照者中为纯合。g.8326G>A变异属于VSX1基因的单核苷酸多态性变化。本研究中检测到的p.R131P是VSX1基因的新突变。首次在中国散发性圆锥角膜患者中鉴定出VSX1基因的序列变异,但其在疾病发生中的精确作用需要进一步研究。