Javidi Bahram, Markman Adam, Rawat Siddharth
Appl Opt. 2018 Mar 1;57(7):B190-B196. doi: 10.1364/AO.57.00B190.
We investigate the use of compact, lensless, single random phase encoding (SRPE) and double random phase encoding (DRPE) systems for automatic cell identification when multiple cells, either of the same or mixed classes, are in the field of view. A microscope glass slide containing the sample is inputted into the single or double random phase encoding system, which is then illuminated by a coherent or partially coherent light source generating a unique opto-biological signature (OBS) that is captured by an image sensor. Statistical features such as mean, standard deviation, skewness, kurtosis, entropy, and Pearson's correlation coefficient are extracted from the OBSs and used for cell identification with the random forest classifier. With the exception of the correlation coefficient, all features were extracted in both the spatial and frequency domains. Experiments are performed with single random phase encoding and double random phase encoding, and system analysis is presented to show the robustness and classification accuracy of the random phase encoding cell identification systems. The proposed systems are compact, as they are lensless and do not have spatial frequency bandwidth limitations due to the numerical aperture of a microscope objective lens. We demonstrate that cell identification is possible using both the SRPE and DRPE systems. While DRPE systems have been extensively used for image encryption, to the best of our knowledge, this is the first report on using DRPE for automated cell identification.
我们研究了紧凑、无透镜的单随机相位编码(SRPE)和双随机相位编码(DRPE)系统在视野中存在多个相同或混合类别的细胞时用于自动细胞识别的情况。将包含样本的显微镜载玻片输入到单随机相位编码或双随机相位编码系统中,然后用相干或部分相干光源照射该系统,生成独特的光学生物特征(OBS),并由图像传感器捕获。从这些OBS中提取诸如均值、标准差、偏度、峰度、熵和皮尔逊相关系数等统计特征,并用于随机森林分类器进行细胞识别。除相关系数外,所有特征均在空间域和频率域中提取。使用单随机相位编码和双随机相位编码进行了实验,并进行了系统分析,以展示随机相位编码细胞识别系统的稳健性和分类准确性。所提出的系统很紧凑,因为它们无透镜,并且不会因显微镜物镜的数值孔径而存在空间频率带宽限制。我们证明了使用SRPE和DRPE系统都可以进行细胞识别。虽然DRPE系统已广泛用于图像加密,但据我们所知,这是关于使用DRPE进行自动细胞识别的首次报道。