Institute of Molecular Physiology and Biotechnology of Plants (IMBIO), University of Bonn, Karlrobert-Kreiten-Straße 13, 53115, Bonn, Germany.
Centro de Ciencias Genómicas, Universidad Nacional Autónoma de México, Avenida Universidad s/n, Colonia Chamilpa, Cuernavaca, Morelos, Mexico.
Chem Phys Lipids. 2018 Jul;213:32-38. doi: 10.1016/j.chemphyslip.2018.03.002. Epub 2018 Mar 7.
Amino acid-containing acyloxyacyl lipids are composed of a 3-hydroxy fatty acid amide-bound to the α-amino group of an amino acid. A second fatty acid is ester-linked to the 3-hydroxy group of the first fatty acid. Most commonly, ornithine is the headgroup of these lipids, but glycine, serineglycine, glutamine and lysine have also been described in bacteria. Ornithine lipids (OL) can be synthesized by about 50% of the sequenced bacterial species, and several covalent modifications of its basic structure have been described. The OL hydroxylase OlsE is widespread in Rhizobium and Agrobacterium species and is responsible for introducing a hydroxyl group at a hence unknown position within the ornithine headgroup causing the formation of the OL named S2. Using NMR on purified OL S2, we show that the OlsE-mediated hydroxylation takes place at the C-4 position of the ornithine headgroup. Furthermore, we identify a hydroxylase in the genome of Pseudopedobacter saltans, distantly related to OlsE from α-proteobacteria, able to hydroxylate the headgroup of both ornithine lipids and lysine lipids. A homology search with the amino acid sequence of this hydroxylase allows us to predict that OL headgroup hydroxylation is not restricted to a few α-proteobacteria, but is apparently also common in many genera belonging to the Cytophaga-Flavobacterium-Bacteroidetes (CFB) group of bacteria.
含氨基酸的酰氧基酰基脂质由与氨基酸的α-氨基结合的 3-羟基脂肪酸酰胺组成。第二个脂肪酸通过酯键与第一个脂肪酸的 3-羟基相连。最常见的是,这些脂质的头基是鸟氨酸,但在细菌中也描述了甘氨酸、丝氨酸、谷氨酰胺和赖氨酸。大约 50%的测序细菌物种可以合成鸟氨酸脂质(OL),并且已经描述了其基本结构的几种共价修饰。OL 羟化酶 OlsE 在根瘤菌和农杆菌物种中广泛存在,负责在鸟氨酸头基内的未知位置引入一个羟基,导致 OL 命名为 S2 的形成。使用纯化的 OL S2 的 NMR,我们表明 OlsE 介导的羟化发生在鸟氨酸头基的 C-4 位置。此外,我们在 Pseudopedobacter saltans 的基因组中鉴定出一种羟化酶,与 α-变形菌中的 OlsE 关系较远,能够羟化鸟氨酸脂质和赖氨酸脂质的头基。用该羟化酶的氨基酸序列进行同源性搜索,使我们能够预测 OL 头基羟化不仅限于少数 α-变形菌,而且显然在属于噬纤维菌-黄杆菌-拟杆菌(CFB)组的许多属中也很常见。