Neoplasma. 2018;65(2):253-261. doi: 10.4149/neo_2018_161217N648.
The study aimed to identify the pivotal genes and pathways involved in prostate cancer metastasis. Using the expression profile dataset GSE7930, downloaded from the Gene Expression Omnibus (GEO) database, differentially expressed genes (DEGs) between primary and highly metastatic prostate cell samples were screened, followed by functional analysis and tumor associated genes (TAG) screening. Protein-protein interaction (PPI) network of DEGs was constructed and module analysis was performed. The expression of DEGs and pathway related genes were evaluated by PCR analysis and the migra- tion ability of prostate tumor cells was observed after FABP4-siRNA blocking. Upregulated FABP4 and GK were signifi- cantly enriched in the PPAR signaling pathway, whereas downregulated IGFBP3 and THBS1 were involved in p53 signaling pathway. Among the identified DEGs, 4 downregulated genes (IGFBP3, NPP4B, THBS1, and PCDH1) and 2 upregulated genes (GJA1 and TUSC3) were TAGs. The module was associated with focal adhesion, ECM-receptor interaction, p53 signaling, and gap junction pathways with the hub node GJA1. After FABP4 silencing by siRNAs in LNcap and metastatic DU-145 cells, the numbers of migrated cells were all significantly declined. The expressions of IGFBP3, TP53 and PPAR were significantly lower in DU-145 cells than in LNcap cells. In conclusion, FABP4, IGFBP3, THBS1, and GJA1 were determined to be potential markers of prostate cancer cell metastasis, and P53, PPAR and gap junction pathways were found to play important roles in prostate cancer cell metastasis. This study may provide helpful guidelines for clinical management.
本研究旨在鉴定前列腺癌转移中涉及的关键基因和途径。使用从基因表达综合数据库(GEO)下载的表达谱数据集 GSE7930,筛选原发和高转移性前列腺细胞样本之间的差异表达基因(DEG),然后进行功能分析和肿瘤相关基因(TAG)筛选。构建 DEG 的蛋白质-蛋白质相互作用(PPI)网络并进行模块分析。通过 PCR 分析评估 DEG 和途径相关基因的表达,并在 FABP4-siRNA 阻断后观察前列腺肿瘤细胞的迁移能力。上调的 FABP4 和 GK 显著富集于 PPAR 信号通路,而下调的 IGFBP3 和 THBS1 参与 p53 信号通路。在鉴定的 DEG 中,有 4 个下调基因(IGFBP3、NPP4B、THBS1 和 PCDH1)和 2 个上调基因(GJA1 和 TUSC3)为 TAG。该模块与粘着斑、ECM-受体相互作用、p53 信号和间隙连接途径相关,其枢纽节点为 GJA1。在 LNcap 和转移性 DU-145 细胞中用 siRNAs 沉默 FABP4 后,迁移细胞的数量均显著减少。与 LNcap 细胞相比,DU-145 细胞中 IGFBP3、TP53 和 PPAR 的表达明显降低。总之,FABP4、IGFBP3、THBS1 和 GJA1 被确定为前列腺癌细胞转移的潜在标志物,p53、PPAR 和间隙连接途径在前列腺癌细胞转移中发挥重要作用。本研究可能为临床管理提供有益的指导。