From the Department of Chemistry and Biochemistry.
UCLA-DOE Institute of Genomics and Proteomics, and.
J Biol Chem. 2018 May 4;293(18):6942-6957. doi: 10.1074/jbc.RA117.000803. Epub 2018 Mar 14.
is a leading cause of life-threatening infections in the United States. It actively acquires the essential nutrient iron from human hemoglobin (Hb) using the iron-regulated surface-determinant (Isd) system. This process is initiated when the closely related bacterial IsdB and IsdH receptors bind to Hb and extract its hemin through a conserved tri-domain unit that contains two NEAr iron Transporter (NEAT) domains that are connected by a helical linker domain. Previously, we demonstrated that the tri-domain unit within IsdH (IsdH) triggers hemin release by distorting Hb's F-helix. Here, we report that IsdH promotes hemin release from both the α- and β-subunits. Using a receptor mutant that only binds to the α-subunit of Hb and a stopped-flow transfer assay, we determined the energetics and micro-rate constants of hemin extraction from tetrameric Hb. We found that at 37 °C, the receptor accelerates hemin release from Hb up to 13,400-fold, with an activation enthalpy of 19.5 ± 1.1 kcal/mol. We propose that hemin removal requires the rate-limiting hydrolytic cleavage of the axial HisF8 Nϵ-Fe bond, which, based on molecular dynamics simulations, may be facilitated by receptor-induced bond hydration. Isothermal titration calorimetry experiments revealed that two distinct IsdH·Hb protein·protein interfaces promote hemin release. A high-affinity receptor·Hb(A-helix) interface contributed ∼95% of the total binding standard free energy, enabling much weaker receptor interactions with Hb's F-helix that distort its hemin pocket and cause unfavorable changes in the binding enthalpy. We present a model indicating that receptor-introduced structural distortions and increased solvation underlie the IsdH-mediated hemin extraction mechanism.
是美国危及生命的感染的主要原因。它通过铁调节表面决定簇(Isd)系统从人类血红蛋白(Hb)中主动获取必需的营养物质铁。当密切相关的细菌 IsdB 和 IsdH 受体结合到 Hb 并通过包含两个近铁转运体(NEAT)结构域的保守三结构域单元提取其血红素时,该过程就开始了,该单元由一个螺旋连接结构域连接。以前,我们证明了 IsdH 中的三结构域单元(IsdH)通过扭曲 Hb 的 F-螺旋触发血红素释放。在这里,我们报告 IsdH 促进来自α-和β-亚基的血红素释放。使用仅与 Hb 的α-亚基结合的受体突变体和停止流动转移测定,我们确定了从四聚体 Hb 中提取血红素的能量学和微率常数。我们发现,在 37°C 下,受体使血红素从 Hb 中的释放速度提高了 13400 倍,活化焓为 19.5±1.1 kcal/mol。我们提出,血红素的去除需要轴向 HisF8 Nϵ-Fe 键的限速水解裂解,这可能通过受体诱导的键水合作用得到促进。等温滴定量热实验表明,两个不同的 IsdH·Hb 蛋白-蛋白界面促进血红素释放。高亲和力受体·Hb(A-螺旋)界面贡献了总结合标准自由能的约 95%,使受体与 Hb 的 F-螺旋的相互作用弱得多,这会扭曲其血红素口袋并导致结合焓的不利变化。我们提出了一个模型,表明受体引入的结构扭曲和增加的溶剂化作用是 IsdH 介导的血红素提取机制的基础。