NanoPack：可视化和处理长读测序数据。
NanoPack: visualizing and processing long-read sequencing data.
机构信息
Neurodegenerative Brain Diseases Group, VIB & University of Antwerp, Antwerp, Belgium.
Bioinformatics, Neuromics Support Facility, Center for Molecular Neurology, VIB & University of Antwerp, Antwerp, Belgium.
出版信息
Bioinformatics. 2018 Aug 1;34(15):2666-2669. doi: 10.1093/bioinformatics/bty149.
SUMMARY
Here we describe NanoPack, a set of tools developed for visualization and processing of long-read sequencing data from Oxford Nanopore Technologies and Pacific Biosciences.
AVAILABILITY AND IMPLEMENTATION
The NanoPack tools are written in Python3 and released under the GNU GPL3.0 License. The source code can be found at https://github.com/wdecoster/nanopack, together with links to separate scripts and their documentation. The scripts are compatible with Linux, Mac OS and the MS Windows 10 subsystem for Linux and are available as a graphical user interface, a web service at http://nanoplot.bioinf.be and command line tools.
SUPPLEMENTARY INFORMATION
Supplementary data are available at Bioinformatics online.
摘要
本文介绍了 NanoPack，这是一套用于可视化和处理牛津纳米孔技术和太平洋生物科学公司长读测序数据的工具。
可用性和实现
NanoPack 工具是用 Python3 编写的，并根据 GNU GPL3.0 许可证发布。源代码可在 https://github.com/wdecoster/nanopack 找到，其中包含单独脚本的链接及其文档。这些脚本与 Linux、Mac OS 和适用于 Linux 的 MS Windows 10 子系统兼容，可作为图形用户界面、http://nanoplot.bioinf.be 上的 Web 服务和命令行工具使用。
补充信息
补充数据可在 Bioinformatics 在线获取。
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