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犬致死性肢端皮炎中 MKLN1 的剪接缺陷。

MKLN1 splicing defect in dogs with lethal acrodermatitis.

机构信息

Institute of Genetics, Vetsuisse Faculty, University of Bern, Bern, Switzerland.

DermFocus, University of Bern, Bern, Switzerland.

出版信息

PLoS Genet. 2018 Mar 22;14(3):e1007264. doi: 10.1371/journal.pgen.1007264. eCollection 2018 Mar.

Abstract

Lethal acrodermatitis (LAD) is a genodermatosis with monogenic autosomal recessive inheritance in Bull Terriers and Miniature Bull Terriers. The LAD phenotype is characterized by poor growth, immune deficiency, and skin lesions, especially at the paws. Utilizing a combination of genome wide association study and haplotype analysis, we mapped the LAD locus to a critical interval of ~1.11 Mb on chromosome 14. Whole genome sequencing of an LAD affected dog revealed a splice region variant in the MKLN1 gene that was not present in 191 control genomes (chr14:5,731,405T>G or MKLN1:c.400+3A>C). This variant showed perfect association in a larger combined Bull Terrier/Miniature Bull Terrier cohort of 46 cases and 294 controls. The variant was absent from 462 genetically diverse control dogs of 62 other dog breeds. RT-PCR analysis of skin RNA from an affected and a control dog demonstrated skipping of exon 4 in the MKLN1 transcripts of the LAD affected dog, which leads to a shift in the MKLN1 reading frame. MKLN1 encodes the widely expressed intracellular protein muskelin 1, for which diverse functions in cell adhesion, morphology, spreading, and intracellular transport processes are discussed. While the pathogenesis of LAD remains unclear, our data facilitate genetic testing of Bull Terriers and Miniature Bull Terriers to prevent the unintentional production of LAD affected dogs. This study may provide a starting point to further clarify the elusive physiological role of muskelin 1 in vivo.

摘要

致死性肢端皮炎(LAD)是一种遗传性皮肤病,在牛头犬和迷你牛头犬中呈单基因常染色体隐性遗传。LAD 表型的特征是生长不良、免疫缺陷和皮肤损伤,尤其是在爪子上。我们利用全基因组关联研究和单倍型分析的组合,将 LAD 基因座定位到 14 号染色体上一个约 1.11Mb 的关键区间。受 LAD 影响的狗的全基因组测序显示,MKLN1 基因的剪接区域变异在 191 个对照基因组中不存在(chr14:5,731,405T>G 或 MKLN1:c.400+3A>C)。该变异在一个更大的包括 46 个病例和 294 个对照的牛头犬/迷你牛头犬联合群体中表现出完美的相关性。该变异不存在于来自 62 个其他犬种的 462 只遗传多样化的对照犬中。对受影响和对照狗的皮肤 RNA 的 RT-PCR 分析表明,LAD 受影响狗的 MKNL1 转录物中第 4 外显子跳过,导致 MKNL1 阅读框移位。MKLN1 编码广泛表达的细胞内蛋白 muskelin 1,其在细胞黏附、形态、扩散和细胞内运输过程中的多种功能正在讨论中。虽然 LAD 的发病机制尚不清楚,但我们的数据为牛头犬和迷你牛头犬的基因检测提供了便利,以防止意外产生受 LAD 影响的狗。这项研究可能为进一步阐明 muskelin 1 在体内难以捉摸的生理作用提供了一个起点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f4b9/5863938/cb36147747f9/pgen.1007264.g001.jpg

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