Genome Integrity and Structural Biology Laboratory, National Institute of Environmental Health Sciences, Research Triangle Park, NC 27709.
Institute of Biochemistry and Biophysics, Polish Academy of Sciences, 02-106 Warsaw, Poland.
Proc Natl Acad Sci U S A. 2018 Apr 17;115(16):4212-4217. doi: 10.1073/pnas.1720353115. Epub 2018 Apr 2.
The fidelity of DNA replication is a critical factor in the rate at which cells incur mutations. Due to the antiparallel orientation of the two chromosomal DNA strands, one strand (leading strand) is replicated in a mostly processive manner, while the other (lagging strand) is synthesized in short sections called Okazaki fragments. A fundamental question that remains to be answered is whether the two strands are copied with the same intrinsic fidelity. In most experimental systems, this question is difficult to answer, as the replication complex contains a different DNA polymerase for each strand, such as, for example, DNA polymerases δ and ε in eukaryotes. Here we have investigated this question in the bacterium , in which the replicase (DNA polymerase III holoenzyme) contains two copies of the same polymerase (Pol III, the gene product), and hence the two strands are copied by the same polymerase. Our in vivo mutagenesis data indicate that the two DNA strands are not copied with the same accuracy, and that, remarkably, the lagging strand has the highest fidelity. We postulate that this effect results from the greater dissociative character of the lagging-strand polymerase, which provides additional options for error removal. Our conclusion is strongly supported by results with antimutator polymerases characterized by increased dissociation rates.
DNA 复制的保真度是细胞突变率的关键因素。由于两条染色体 DNA 链的反平行取向,一条链(前导链)以大多是连续的方式复制,而另一条链(滞后链)则以称为 Okazaki 片段的短片段合成。一个尚未解决的基本问题是两条链是否以相同的内在保真度进行复制。在大多数实验系统中,这个问题很难回答,因为复制复合物包含每种链的不同 DNA 聚合酶,例如,真核生物中的 DNA 聚合酶 δ 和 ε。在这里,我们在细菌中研究了这个问题,其中复制酶(DNA 聚合酶 III 全酶)包含相同聚合酶(Pol III,基因产物)的两个副本,因此两条链由相同的聚合酶复制。我们的体内诱变数据表明,两条 DNA 链的复制精度不同,而且非常显著的是,滞后链具有最高的保真度。我们假设这种效应是由于滞后链聚合酶的更大解离特性导致的,这为错误消除提供了更多选择。我们的结论得到了具有更高解离速率的抗突变聚合酶的结果的有力支持。