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先天病毒的古病毒学:从先天病毒的分子化石中学到了什么。

Paleovirology of bornaviruses: What can be learned from molecular fossils of bornaviruses.

机构信息

Hakubi Center for Advanced Research, Kyoto University, Kyoto, Japan; Department of Virus Research, Institute for Frontier Life and Medical Sciences, Kyoto University, Kyoto, Japan.

Department of Virus Research, Institute for Frontier Life and Medical Sciences, Kyoto University, Kyoto, Japan; Department of Mammalian Regulatory Network, Graduate School of Biostudies, Kyoto University, Kyoto, Japan.

出版信息

Virus Res. 2019 Mar;262:2-9. doi: 10.1016/j.virusres.2018.04.006. Epub 2018 Apr 6.

Abstract

Endogenous viral elements (EVEs) are virus-derived sequences embedded in eukaryotic genomes formed by germline integration of viral sequences. As many EVEs were integrated into eukaryotic genomes millions of years ago, EVEs are considered molecular fossils of viruses. EVEs can be valuable informational sources about ancient viruses, including their time scale, geographical distribution, genetic information, and hosts. Although integration of viral sequences is not required for replications of viruses other than retroviruses, many non-retroviral EVEs have been reported to exist in eukaryotes. Investigation of these EVEs has expanded our knowledge regarding virus-host interactions, as well as provided information on ancient viruses. Among them, EVEs derived from bornaviruses, non-retroviral RNA viruses, have been relatively well studied. Bornavirus-derived EVEs are widely distributed in animal genomes, including the human genome, and the history of bornaviruses can be dated back to more than 65 million years. Although there are several reports focusing on the biological significance of bornavirus-derived sequences in mammals, paleovirology of bornaviruses has not yet been well described and summarized. In this paper, we describe what can be learned about bornaviruses from endogenous bornavirus-like elements from the view of paleovirology using published results and our novel data.

摘要

内源性病毒元件(EVEs)是整合入真核生物基因组的病毒衍生序列,通过病毒序列的种系整合形成。由于许多 EVEs 是在数百万年前整合到真核生物基因组中的,因此它们被认为是病毒的分子化石。EVEs 可以作为关于古代病毒的有价值的信息来源,包括它们的时间尺度、地理分布、遗传信息和宿主。虽然除逆转录病毒外,其他病毒的复制并不需要病毒序列的整合,但已报道许多非逆转录病毒的 EVEs 存在于真核生物中。对这些 EVEs 的研究扩展了我们对病毒-宿主相互作用的认识,并提供了有关古代病毒的信息。其中,源自副黏液病毒科病毒、非逆转录 RNA 病毒的 EVEs 已得到了相对较好的研究。副黏液病毒科病毒衍生的 EVEs 在动物基因组中广泛分布,包括人类基因组,并且副黏液病毒科病毒的历史可以追溯到 6500 多万年前。尽管有一些报道集中在哺乳动物中副黏液病毒科衍生序列的生物学意义上,但副黏液病毒科的古病毒学尚未得到很好的描述和总结。在本文中,我们使用已发表的结果和我们的新数据,从古病毒学的角度描述可以从内源性副黏液病毒样元件中了解到的关于副黏液病毒科的知识。

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