Department of Gastroenterology and Hepatology, Chinese People's Liberation Army General Hospital, Beijing, China.
Division of Gastroenterology and Hepatology, Shenzhen University Health Science Center, Shenzhen, Guangdong Province, China.
J Dig Dis. 2018 May;19(5):295-300. doi: 10.1111/1751-2980.12597. Epub 2018 May 6.
To investigate whether single nucleotide polymorphisms (SNPs) in the mitochondrial displacement loop (D-loop) were associated with irritable bowel syndrome (IBS).
Altogether 40 participants were recruited and classified into three groups, including 20 that fulfilled the Rome III criteria for diarrhea-predominant IBS (IBS-D), 10 with constipation-predominant IBS (IBS-C), and 10 healthy volunteers (controls). DNA was extracted from biopsy specimens of the colon obtained during routine colonoscopies. The mitochondrial D-loop was sequenced and variants were identified in comparison with the reference sequence from GenBank. We searched GenBank and MITOMAP to determine whether a variant could be considered an SNP.
No significant differences in sex, age and body mass index were found among the three groups. The average numbers of SNPs in the IBS-D, IBS-C and control groups were 12.2 ± 2.7, 9.8 ± 1.8 and 9.9 ± 2.1, respectively. The frequency of SNPs was significantly higher in the IBS-D group than in the IBS-C group and controls (P < 0.05). No significant difference was found between the latter two groups. Each SNP was compared among the three groups and the frequency of 199C was found to be significantly higher in the control group than in the IBS-D group (P = 0.03), but no significant difference in its frequency was found between the IBS-C group and controls.
Patients with IBS-D have a higher incidence of SNPs in the mitochondrial D-loop than controls. The genotype 199C may be associated with a lower risk of IBS-D.
研究线粒体置换环(D 环)中的单核苷酸多态性(SNPs)是否与肠易激综合征(IBS)相关。
共招募了 40 名参与者,并将其分为三组,包括 20 名符合罗马 III 标准的腹泻型肠易激综合征(IBS-D)患者、10 名便秘型肠易激综合征(IBS-C)患者和 10 名健康志愿者(对照组)。从常规结肠镜检查获得的结肠活检标本中提取 DNA。对线粒体 D 环进行测序,并与 GenBank 中的参考序列进行比较,以确定是否可以将变体视为 SNP。
三组间的性别、年龄和体重指数无显著差异。IBS-D、IBS-C 和对照组的平均 SNP 数分别为 12.2±2.7、9.8±1.8 和 9.9±2.1。IBS-D 组的 SNP 频率明显高于 IBS-C 组和对照组(P<0.05),后两组之间无显著差异。在三组间比较每个 SNP 的频率,发现对照组的 199C 频率明显高于 IBS-D 组(P=0.03),但 IBS-C 组与对照组之间的 199C 频率无显著差异。
IBS-D 患者线粒体 D 环的 SNP 发生率高于对照组。基因型 199C 可能与 IBS-D 的低风险相关。