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来自结核分枝杆菌H37Rv的假定相容性溶质结合蛋白ProX:生化特性及晶体学数据

The putative compatible solute-binding protein ProX from Mycobacterium tuberculosis H37Rv: biochemical characterization and crystallographic data.

作者信息

Zhao Jian Hong, Chen Jiang Huai, Wang Yong, Wang Zhi Ping, He Yong Xing

机构信息

Institute of Urology, Lanzhou University Second Hospital, Key Laboratory of Gansu Province for Urological Diseases, Clinical Center of Gansu Province for Nephrourology, Lanzhou 730000, People's Republic of China.

MOE Key Laboratory of Cell Activities and Stress Adaptations, School of Life Sciences, Lanzhou University, Lanzhou 730000, People's Republic of China.

出版信息

Acta Crystallogr F Struct Biol Commun. 2018 Apr 1;74(Pt 4):231-235. doi: 10.1107/S2053230X18003771. Epub 2018 Mar 23.

Abstract

In Mycobacterium tuberculosis, the proX gene encodes a putative compatible solute-binding protein (MtProX). However, it was found through sequence alignment that the MtProX protein has very different ligand-binding residues compared with other compatible solute-binding proteins, implying that MtProX may bind to ligands that are as yet uncharacterized. In this work, it was demonstrated that MtProX binds to polyphenols such as phloretin, monoacetylphloroglucinol and 2,4-dihydroxyacetophloroglucinol with dissociation constants between 20 and 70 µM. Crystals of MtProX were obtained using a precipitant consisting of 0.2 M NaCl, 0.1 M Tris pH 8.5, 25%(w/v) polyethylene glycol 3350. The crystals diffracted to 2.10 Å resolution and belonged to space group P422, with unit-cell parameters a = b = 90.17, c = 161.92 Å, α = β = γ = 90.0°. Assuming the presence of two MtProX molecules in the asymmetric unit, the Matthews coefficient was calculated to be 2.74 Å Da, which corresponds to a solvent content of 55%.

摘要

在结核分枝杆菌中,proX基因编码一种假定的相容性溶质结合蛋白(MtProX)。然而,通过序列比对发现,与其他相容性溶质结合蛋白相比,MtProX蛋白具有非常不同的配体结合残基,这意味着MtProX可能结合尚未被表征的配体。在这项研究中,已证明MtProX与根皮素、单乙酰间苯三酚和2,4 - 二羟基乙酰间苯三酚等多酚类物质结合,解离常数在20至70 μM之间。使用由0.2 M NaCl、0.1 M Tris pH 8.5、25%(w/v)聚乙二醇3350组成的沉淀剂获得了MtProX的晶体。这些晶体的衍射分辨率为2.10 Å,属于空间群P422,晶胞参数a = b = 90.17,c = 161.92 Å,α = β = γ = 90.0°。假设不对称单元中存在两个MtProX分子,计算得到的马修斯系数为2.74 ų Da,对应于55%的溶剂含量。

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