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印度人群双链断裂修复基因的多态性变异:与世界各族群变异的比较研究

Polymorphic Variation in Double Strand Break Repair Gene in Indian Population: A Comparative Approach with Worldwide Ethnic Group Variations.

作者信息

Mandal Raju Kumar, Mittal Rama Devi

机构信息

Department of Urology and Renal Transplantation, Sanjay Gandhi Post Graduate Institute of Medical Sciences, Raebareli Road, Lucknow, Uttar Pradesh 226014 India.

出版信息

Indian J Clin Biochem. 2018 Apr;33(2):184-189. doi: 10.1007/s12291-017-0665-2. Epub 2017 Jul 22.

Abstract

DNA repair capacity is essential in maintaining cellular functions and homeostasis. Identification of genetic polymorphisms responsible for reduced DNA repair capacity may allow better cancer prevention. Double strand break repair pathway plays critical roles in maintaining genome stability. Present study was conducted to determine distribution of Exon 7 (C18067T, rs861539) and Intron 8 (G6721T, rs7003908) gene polymorphisms in North Indian population and compare with different populations globally. The genotype assays were performed in 224 normal healthy individuals of similar ethnicity using the polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP). Allelic frequencies of wild type were 79% (C) in Exon 7 C > T and 57% (G) in Intron 8 (G > T) 57% (G) observed. On the other hand, the variant allele frequency were 21% (T) in Exon 7 C > T and 43% (T) in Intron 8 G > T respectively. Major differences from other ethnic populations were observed. Our results suggest that frequency in these DNA repair genes exhibit distinctive pattern in India that could be attributed to ethnicity variation. This could assist in high-risk screening of humans exposed to environmental carcinogens and cancer predisposition in different ethnic groups.

摘要

DNA修复能力对于维持细胞功能和体内平衡至关重要。识别导致DNA修复能力降低的基因多态性可能有助于更好地预防癌症。双链断裂修复途径在维持基因组稳定性方面起着关键作用。本研究旨在确定印度北部人群中外显子7(C18067T,rs861539)和内含子8(G6721T,rs7003908)基因多态性的分布,并与全球不同人群进行比较。使用聚合酶链反应-限制性片段长度多态性(PCR-RFLP)对224名种族相似的正常健康个体进行基因型检测。在外显子7 C>T中,野生型等位基因频率为79%(C),在内含子8(G>T)中为57%(G)。另一方面,外显子7 C>T中的变异等位基因频率分别为21%(T),内含子8 G>T中的变异等位基因频率为43%(T)。观察到与其他种族人群的主要差异。我们的结果表明,这些DNA修复基因的频率在印度呈现出独特的模式,这可能归因于种族差异。这有助于对暴露于环境致癌物的人群进行高风险筛查,并了解不同种族群体的癌症易感性。

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