• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

转录基准剂量模型在推导与太阳模拟紫外线辐射暴露相关的效应阈值中的应用。

The application of transcriptional benchmark dose modeling for deriving thresholds of effects associated with solar-simulated ultraviolet radiation exposure.

作者信息

Qutob Sami S, Chauhan Vinita, Kuo Byron, Williams Andrew, Yauk Carole L, McNamee James P, Gollapudi B

机构信息

Consumer and Clinical Radiation Protection Bureau, Health Canada, Ottawa, Ontario, K1A 1C1, Canada.

Environmental Health Science and Research Bureau, Health Canada, Ottawa, Ontario, Canada.

出版信息

Environ Mol Mutagen. 2018 Jul;59(6):502-515. doi: 10.1002/em.22196. Epub 2018 May 15.

DOI:10.1002/em.22196
PMID:29761935
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6099464/
Abstract

Considerable data has been generated to elucidate the transcriptional response of cells to ultraviolet radiation (UVR) exposure providing a mechanistic understanding of UVR-induced cellular responses. However, using these data to support standards development has been challenging. In this study, we apply benchmark dose (BMD) modeling of transcriptional data to derive thresholds of gene responsiveness following exposure to solar-simulated UVR. Human epidermal keratinocytes were exposed to three doses (10, 20, 150 kJ/m ) of solar simulated UVR and assessed for gene expression changes 6 and 24 hr postexposure. The dose-response curves for genes with p-fit values (≥ 0.1) were used to derive BMD values for genes and pathways. Gene BMDs were bi-modally distributed, with a peak at ∼16 kJ/m and ∼108 kJ/m UVR exposure. Genes/pathways within Mode 1 were involved in cell signaling and DNA damage response, while genes/pathways in the higher Mode 2 were associated with immune response and cancer development. The median value of each Mode coincides with the current human exposure limits for UVR and for the minimal erythemal dose, respectively. Such concordance implies that the use of transcriptional BMD data may represent a promising new approach for deriving thresholds of actinic effects. Environ. Mol. Mutagen. 59:502-515, 2018. © 2018 The Authors Environmental and Molecular Mutagenesis published by Wiley Periodicals, Inc. on behalf of Environmental Mutagen Society.

摘要

为了阐明细胞对紫外线辐射(UVR)暴露的转录反应,已经产生了大量数据,从而对UVR诱导的细胞反应有了机制上的理解。然而,利用这些数据来支持标准制定一直具有挑战性。在本研究中,我们应用转录数据的基准剂量(BMD)建模来推导暴露于太阳模拟UVR后基因反应性的阈值。将人类表皮角质形成细胞暴露于三种剂量(10、20、150 kJ/m²)的太阳模拟UVR下,并在暴露后6小时和24小时评估基因表达变化。使用p拟合值(≥0.1)的基因剂量反应曲线来推导基因和通路的BMD值。基因BMD呈双峰分布,在UVR暴露约16 kJ/m²和约108 kJ/m²处出现峰值。模式1中的基因/通路参与细胞信号传导和DNA损伤反应,而较高的模式2中的基因/通路与免疫反应和癌症发展相关。每个模式的中值分别与当前UVR的人类暴露限值和最小红斑剂量一致。这种一致性意味着使用转录BMD数据可能代表一种推导光化效应阈值的有前途的新方法。《环境与分子诱变》59:502 - 515,2018年。© 2018作者。《环境与分子诱变》由威利期刊公司代表环境诱变协会出版。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1c93/6099464/8163b09d67f7/EM-59-502-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1c93/6099464/8163b09d67f7/EM-59-502-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1c93/6099464/8163b09d67f7/EM-59-502-g001.jpg

相似文献

1
The application of transcriptional benchmark dose modeling for deriving thresholds of effects associated with solar-simulated ultraviolet radiation exposure.转录基准剂量模型在推导与太阳模拟紫外线辐射暴露相关的效应阈值中的应用。
Environ Mol Mutagen. 2018 Jul;59(6):502-515. doi: 10.1002/em.22196. Epub 2018 May 15.
2
Solar ultraviolet-induced erythema in human skin and nuclear factor-kappa-B-dependent gene expression in keratinocytes are modulated by a French maritime pine bark extract.法国海岸松皮提取物可调节人类皮肤中太阳紫外线诱导的红斑以及角质形成细胞中核因子-κB依赖性基因表达。
Free Radic Biol Med. 2001 Jan 15;30(2):154-60. doi: 10.1016/s0891-5849(00)00445-7.
3
Transcription factors and stress response gene alterations in human keratinocytes following Solar Simulated Ultra Violet Radiation.经太阳模拟紫外线辐射后,人类角质细胞中的转录因子和应激反应基因的改变。
Sci Rep. 2017 Oct 19;7(1):13622. doi: 10.1038/s41598-017-13765-7.
4
Transcriptional benchmark dose modeling: Exploring how advances in chemical risk assessment may be applied to the radiation field.转录基准剂量建模:探索化学风险评估的进展如何应用于辐射领域。
Environ Mol Mutagen. 2016 Oct;57(8):589-604. doi: 10.1002/em.22043. Epub 2016 Sep 7.
5
UV-Induced Molecular Signaling Differences in Melanoma and Non-melanoma Skin Cancer.紫外线诱导的黑色素瘤和非黑色素瘤皮肤癌中的分子信号差异
Adv Exp Med Biol. 2017;996:27-40. doi: 10.1007/978-3-319-56017-5_3.
6
A novel immediate early response gene, IEX-1, is induced by ultraviolet radiation in human keratinocytes.一种新型的即刻早期反应基因IEX-1,在人角质形成细胞中受紫外线辐射诱导。
Biochem Biophys Res Commun. 1998 Dec 18;253(2):336-41. doi: 10.1006/bbrc.1998.9692.
7
Development and repair of cataract induced by ultraviolet radiation.紫外线诱导白内障的发生与修复
Ophthalmic Res. 2000;32 Suppl 1:ii-iii; 1-44.
8
Ultraviolet radiation stimulates expression of Snail family transcription factors in keratinocytes.紫外线辐射刺激角质形成细胞中蜗牛家族转录因子的表达。
Mol Carcinog. 2007 Apr;46(4):257-68. doi: 10.1002/mc.20257.
9
In vitro tools for photobiological testing: molecular responses to simulated solar UV of keratinocytes growing as monolayers or as part of reconstructed skin.体外光生物学测试工具:在单层或作为重建皮肤一部分生长的角质形成细胞中模拟太阳紫外线的分子反应。
Photochem Photobiol Sci. 2010 Apr;9(4):448-58. doi: 10.1039/b9pp00145j.
10
The use of in vitro transcriptional data to identify thresholds of effects in a human lens epithelial cell-line exposed to ionizing radiation.使用体外转录数据识别暴露于电离辐射的人晶状体上皮细胞系中的效应阈值。
Int J Radiat Biol. 2019 Feb;95(2):156-169. doi: 10.1080/09553002.2019.1539883. Epub 2018 Nov 29.

引用本文的文献

1
Signature analysis of high-throughput transcriptomics screening data for mechanistic inference and chemical grouping.高通量转录组筛选数据的特征分析用于机制推断和化学分组。
Toxicol Sci. 2024 Nov 1;202(1):103-122. doi: 10.1093/toxsci/kfae108.
2
Metabolomics Simultaneously Derives Benchmark Dose Estimates and Discovers Metabolic Biotransformations in a Rat Bioassay.代谢组学同时推导出基准剂量估计值,并在大鼠生物测定中发现代谢生物转化。
Chem Res Toxicol. 2024 Jun 17;37(6):923-934. doi: 10.1021/acs.chemrestox.4c00002. Epub 2024 Jun 6.
3
From vision toward best practices: Evaluating transcriptomic points of departure for application in risk assessment using a uniform workflow.

本文引用的文献

1
Editor's Highlight: Application of Gene Set Enrichment Analysis for Identification of Chemically Induced, Biologically Relevant Transcriptomic Networks and Potential Utilization in Human Health Risk Assessment.编辑亮点:基因集富集分析在鉴定化学诱导的、生物学相关转录组网络中的应用及在人类健康风险评估中的潜在利用。
Toxicol Sci. 2017 May 1;157(1):85-99. doi: 10.1093/toxsci/kfx021.
2
Recommended approaches in the application of toxicogenomics to derive points of departure for chemical risk assessment.应用毒理基因组学推导化学物质风险评估起始点的推荐方法。
Arch Toxicol. 2017 May;91(5):2045-2065. doi: 10.1007/s00204-016-1886-5. Epub 2016 Dec 7.
3
从愿景到最佳实践:使用统一工作流程评估转录组学出发点以应用于风险评估
Front Toxicol. 2023 May 23;5:1194895. doi: 10.3389/ftox.2023.1194895. eCollection 2023.
4
UV-induced reduction in Polycomb repression promotes epidermal pigmentation.UV 诱导的多梳抑制减少促进表皮色素沉着。
Dev Cell. 2021 Sep 27;56(18):2547-2561.e8. doi: 10.1016/j.devcel.2021.08.006. Epub 2021 Sep 1.
5
Paving the way for application of next generation risk assessment to safety decision-making for cosmetic ingredients.为将下一代风险评估应用于化妆品成分的安全决策铺平道路。
Regul Toxicol Pharmacol. 2021 Oct;125:105026. doi: 10.1016/j.yrtph.2021.105026. Epub 2021 Aug 10.
6
Considerations for Strategic Use of High-Throughput Transcriptomics Chemical Screening Data in Regulatory Decisions.监管决策中高通量转录组学化学筛选数据的战略应用考量
Curr Opin Toxicol. 2019;15:64-75. doi: 10.1016/j.cotox.2019.05.004.
A general theory of effect size, and its consequences for defining the benchmark response (BMR) for continuous endpoints.
一种通用的效应大小理论,及其对定义连续终点的基准反应(BMR)的影响。
Crit Rev Toxicol. 2017 Apr;47(4):342-351. doi: 10.1080/10408444.2016.1241756. Epub 2016 Nov 2.
4
Transcriptional benchmark dose modeling: Exploring how advances in chemical risk assessment may be applied to the radiation field.转录基准剂量建模:探索化学风险评估的进展如何应用于辐射领域。
Environ Mol Mutagen. 2016 Oct;57(8):589-604. doi: 10.1002/em.22043. Epub 2016 Sep 7.
5
BMDExpress Data Viewer - a visualization tool to analyze BMDExpress datasets.BMDExpress数据查看器 - 一种用于分析BMDExpress数据集的可视化工具。
J Appl Toxicol. 2016 Aug;36(8):1048-59. doi: 10.1002/jat.3265. Epub 2015 Dec 15.
6
Impact of Genomics Platform and Statistical Filtering on Transcriptional Benchmark Doses (BMD) and Multiple Approaches for Selection of Chemical Point of Departure (PoD).基因组学平台和统计筛选对转录基准剂量(BMD)的影响以及化学出发剂量(PoD)选择的多种方法
PLoS One. 2015 Aug 27;10(8):e0136764. doi: 10.1371/journal.pone.0136764. eCollection 2015.
7
Comparison of toxicogenomics and traditional approaches to inform mode of action and points of departure in human health risk assessment of benzo[a]pyrene in drinking water.毒理基因组学与传统方法在告知饮用水中苯并[a]芘的人类健康风险评估作用机制和起始点方面的比较
Crit Rev Toxicol. 2015 Jan;45(1):1-43. doi: 10.3109/10408444.2014.973934.
8
Case study on the utility of hepatic global gene expression profiling in the risk assessment of the carcinogen furan.关于呋喃致癌风险评估中肝全局基因表达谱应用的案例研究。
Toxicol Appl Pharmacol. 2014 Jan 1;274(1):63-77. doi: 10.1016/j.taap.2013.10.019. Epub 2013 Oct 29.
9
Concordance of transcriptional and apical benchmark dose levels for conazole-induced liver effects in mice.转录和顶端基准剂量水平对唑类药物诱导的小鼠肝脏效应的一致性。
Toxicol Sci. 2013 Nov;136(1):205-15. doi: 10.1093/toxsci/kft182. Epub 2013 Aug 22.
10
Incorporating new technologies into toxicity testing and risk assessment: moving from 21st century vision to a data-driven framework.将新技术纳入毒性测试和风险评估中:从 21 世纪的愿景迈向数据驱动的框架。
Toxicol Sci. 2013 Nov;136(1):4-18. doi: 10.1093/toxsci/kft178. Epub 2013 Aug 19.