从紫扇贝（Argopecten purpuratus）肠道微生物群中分离出的一株具有产生类细菌素抑制物质潜力的新型弧菌的基因组序列草图
Draft Genome Sequence of a New Vibrio Strain with the Potential To Produce Bacteriocin-Like Inhibitory Substances, Isolated from the Gut Microflora of Scallop (Argopecten purpuratus).
作者信息
Serrano Wilbert, Tarazona Ulrike I, Olaechea Raul M, Friedrich Michael W
机构信息
Carrera de Biología Marina, Facultad de Ciencias Veterinarias y Biológicas, Universidad Científica del Sur, Lima, Peru
Microbial Ecophysiology Group, Faculty of Biology/Chemistry and MARUM, Center for Marine Environmental Sciences, University of Bremen, Bremen, Germany.
出版信息
Genome Announc. 2018 May 17;6(20):e00419-18. doi: 10.1128/genomeA.00419-18.
Abstract
A new strain, V7A, was isolated from the intestinal tract of the Peruvian scallop (). Strain V7A clusters within the Mediterranei clade of the genus and has the potential to produce bacteriocin-like inhibitory substances (BLIS). Here, we report the draft genome sequence of strain V7A.
摘要
从秘鲁扇贝的肠道中分离出一种新菌株V7A。V7A菌株聚集在该属的地中海分支内，具有产生类细菌素抑制物质（BLIS）的潜力。在此，我们报告了V7A菌株的基因组草图序列。
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本文引用的文献
1
Draft Genome Sequence of sp. Strain V1B Isolated from the Gut Microflora of the Scallop .
Genome Announc. 2017 Oct 19;5(42):e01130-17. doi: 10.1128/genomeA.01130-17.
2
New Insights into Pathogenic Vibrios Affecting Bivalves in Hatcheries: Present and Future Prospects.
Front Microbiol. 2017 May 3;8:762. doi: 10.3389/fmicb.2017.00762. eCollection 2017.
3
JSpeciesWS: a web server for prokaryotic species circumscription based on pairwise genome comparison.
Bioinformatics. 2016 Mar 15;32(6):929-31. doi: 10.1093/bioinformatics/btv681. Epub 2015 Nov 16.
4
Trimmomatic: a flexible trimmer for Illumina sequence data.
Bioinformatics. 2014 Aug 1;30(15):2114-20. doi: 10.1093/bioinformatics/btu170. Epub 2014 Apr 1.
5
New insights into Oculina patagonica coral diseases and their associated Vibrio spp. communities.
ISME J. 2014 Sep;8(9):1794-807. doi: 10.1038/ismej.2014.33. Epub 2014 Mar 13.
6
New Vibrio species associated to molluscan microbiota: a review.
Front Microbiol. 2014 Jan 2;4:413. doi: 10.3389/fmicb.2013.00413.
7
The SEED and the Rapid Annotation of microbial genomes using Subsystems Technology (RAST).
Nucleic Acids Res. 2014 Jan;42(Database issue):D206-14. doi: 10.1093/nar/gkt1226. Epub 2013 Nov 29.
8
SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing.
J Comput Biol. 2012 May;19(5):455-77. doi: 10.1089/cmb.2012.0021. Epub 2012 Apr 16.
9
Phylogeographical patterns among Mediterranean sepiolid squids and their Vibrio symbionts: environment drives specificity among sympatric species.
Appl Environ Microbiol. 2011 Jan;77(2):642-9. doi: 10.1128/AEM.02105-10. Epub 2010 Nov 12.
10
Phylogenetic analysis of vibrios and related species by means of atpA gene sequences.
Int J Syst Evol Microbiol. 2007 Nov;57(Pt 11):2480-2484. doi: 10.1099/ijs.0.65223-0.
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