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POY version 4: phylogenetic analysis using dynamic homologies.POY版本4:使用动态同源性的系统发育分析。
Cladistics. 2010 Feb;26(1):72-85. doi: 10.1111/j.1096-0031.2009.00282.x. Epub 2009 Sep 24.
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Laboratory Culture of the Sepiolid Squid Euprymna scolopes: A Model System for Bacteria-Animal Symbiosis.乌贼Euprymna scolopes的实验室培养:细菌 - 动物共生的模型系统
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Biodiversity among luminescent symbionts from squid of the genera Uroteuthis, Loliolus and Euprymna (Mollusca: Cephalopoda).来自尾枪乌贼属、艾氏乌贼属和微鳍乌贼属(软体动物:头足纲)鱿鱼的发光共生体之间的生物多样性。
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THE EVOLUTIONARY ECOLOGY OF A SEPIOLID SQUID-VIBRIO ASSOCIATION: FROM CELL TO ENVIRONMENT.一种乌贼 - 弧菌共生关系的进化生态学:从细胞到环境
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Arlequin (version 3.0): an integrated software package for population genetics data analysis.Arlequin(版本 3.0):一个用于群体遗传学数据分析的集成软件包。
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Population structure of Vibrio fischeri within the light organs of Euprymna scolopes squid from Two Oahu (Hawaii) populations.来自瓦胡岛(夏威夷)两个种群的夏威夷短尾乌贼发光器官内费氏弧菌的种群结构。
Appl Environ Microbiol. 2009 Jan;75(1):193-202. doi: 10.1128/AEM.01792-08. Epub 2008 Nov 7.
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Salinity and temperature effects on physiological responses of Vibrio fischeri from diverse ecological niches.盐度和温度对来自不同生态位的费氏弧菌生理反应的影响。
Microb Ecol. 2009 Jan;57(1):140-50. doi: 10.1007/s00248-008-9412-9. Epub 2008 Jun 28.
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The coup de grâce for the nested clade phylogeographic analysis?嵌套分支系统发育地理学分析的致命一击?
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Pillars of Hercules: is the Atlantic-Mediterranean transition a phylogeographical break?直布罗陀海峡:大西洋-地中海过渡区是一个系统发育地理学上的间断区域吗?
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10
Testing hypotheses of population structuring in the Northeast Atlantic Ocean and Mediterranean Sea using the common cuttlefish Sepia officinalis.利用普通乌贼(Sepia officinalis)检验东北大西洋和地中海种群结构的假设。
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地中海鱿鱼及其共生弧菌的系统地理格局:环境驱动同域物种之间的特异性。

Phylogeographical patterns among Mediterranean sepiolid squids and their Vibrio symbionts: environment drives specificity among sympatric species.

机构信息

Department of Biology, MSC 3AF, New Mexico State University, P.O. Box 30001, Las Cruces, NM 88003-8001, USA.

出版信息

Appl Environ Microbiol. 2011 Jan;77(2):642-9. doi: 10.1128/AEM.02105-10. Epub 2010 Nov 12.

DOI:10.1128/AEM.02105-10
PMID:21075896
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3020525/
Abstract

Bobtail squid from the genera Sepiola and Rondeletiola (Cephalopoda: Sepiolidae) form mutualistic associations with luminous Gram-negative bacteria (Gammaproteobacteria: Vibrionaceae) from the genera Vibrio and Photobacterium. Symbiotic bacteria proliferate inside a bilobed light organ until they are actively expelled by the host into the surrounding environment on a diel basis. This event results in a dynamic symbiont population with the potential to establish the symbiosis with newly hatched sterile (axenic) juvenile sepiolids. In this study, we examined the genetic diversity found in populations of sympatric sepiolid squid species and their symbionts by the use of nested clade analysis with multiple gene analyses. Variation found in the distribution of different species of symbiotic bacteria suggests a strong influence of abiotic factors in the local environment, affecting bacterial distribution among sympatric populations of hosts. These abiotic factors include temperature differences incurred by a shallow thermocline, as well as a lack of strong coastal water movement accompanied by seasonal temperature changes in overlapping niches. Host populations are stable and do not appear to have a significant role in the formation of symbiont populations relative to their distribution across the Mediterranean Sea. Additionally, all squid species examined (Sepiola affinis, S. robusta, S. ligulata, S. intermedia, and Rondeletiola minor) are genetically distinct from one another regardless of location and demonstrate very little intraspecific variation within species. These findings suggest that physical boundaries and distance in relation to population size, and not host specificity, are important factors in limiting or defining gene flow within sympatric marine squids and their associated bacterial symbionts in the Mediterranean Sea.

摘要

短尾鱿鱼属和 Rondeletiola 属(头足纲:鱿鱼科)的鱿鱼与发光革兰氏阴性菌(γ-变形菌纲:弧菌科)形成共生关系,这些细菌来自 Vibrio 和 Photobacterium 属。共生细菌在双叶光器官内增殖,直到它们被宿主主动排出到周围环境中,这一过程是昼夜节律性的。这一事件导致共生体种群具有动态性,并有可能与新孵化的无菌(无菌)幼年鱿鱼建立共生关系。在这项研究中,我们通过多基因嵌套类群分析,研究了共生鱿鱼种及其共生体在同域种群中的遗传多样性。共生细菌分布的变化表明,非生物因素在当地环境中具有强烈的影响,影响着宿主同域种群中细菌的分布。这些非生物因素包括浅层温跃层引起的温度差异,以及缺乏伴随季节温度变化的强烈沿海水动力。宿主种群稳定,相对于其在地中海的分布,在共生体种群的形成中似乎没有显著作用。此外,所有检查的鱿鱼物种(短尾鱿鱼、强壮鱿鱼、鱿鱼 ligulata、中间鱿鱼和 Rondeletiola 小鱼)在遗传上彼此不同,无论其位置如何,并且在物种内表现出很少的种内变异。这些发现表明,与种群大小有关的物理边界和距离,而不是宿主特异性,是限制或定义共生海洋鱿鱼及其在地中海相关细菌共生体中基因流动的重要因素。