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来自吸血鬼蜗牛 Cumia reticulata 的抗凝血化合物:分子克隆和计算机结构功能分析。

Anti-haemostatic compounds from the vampire snail Cumia reticulata: Molecular cloning and in-silico structure-function analysis.

机构信息

Department EMI, Stazione Zoologica Anton Dohrn, Villa Comunale, I-80121, Naples, Italy, Italy.

Department of Science, Roma Tre University, Viale Guglielmo Marconi 446, I-00146, Rome, Italy.

出版信息

Comput Biol Chem. 2018 Aug;75:168-177. doi: 10.1016/j.compbiolchem.2018.05.014. Epub 2018 May 16.

Abstract

Blood-feeding animals are known for their ability to produce bioactive compounds to impair haemostasis and suppress pain perception in the host. These compounds are extremely appealing for pharmacological development since they are generally very effective and specific for their molecular target. A preliminary RNA-Seq based characterization of the secretion from salivary and mid-oesophageal tissues of the vampire snail Cumia reticulata, revealed a complex mixture of feeding-related transcripts with potential anaesthetic and anticoagulant action. Based on the cloned full-length mRNAs, it was possible to verify the sequence of five genes encoding haematophagy-related products. The in silico modelled three-dimensional structure of each translational product was analysed to gain information on their potential biochemical activity. We have hereby validated and further investigated the assembled transcripts presumably involved in the antihaemostatic action, to improve our comprehensive understanding of this subset of the feeding secretion. The studied proteins included both inhibitors of primary haemostasis such as the vWFA domain-containing proteins, and compounds targeting different steps of the coagulation cascade, as e.g. the Turripeptide-like/protease inhibitor, the TFPI-like multiple Kunitz-type protease inhibitors, the Meprin-like metalloproteases and the Astacin/ShKT-like domain-containing proteins. All these molecules showed promising potential for pharmacological development.

摘要

吸血动物以其产生生物活性化合物的能力而闻名,这些化合物能够损害宿主的止血功能并抑制疼痛感知。由于这些化合物通常对其分子靶标非常有效和特异,因此它们非常适合用于药物开发。对吸血蜗牛 Cumia reticulata 的唾液和食管中段组织分泌产物进行的初步基于 RNA-Seq 的特征分析揭示了一种与摄食相关的转录本的复杂混合物,这些转录本具有潜在的麻醉和抗凝作用。基于克隆的全长 mRNAs,能够验证编码与吸血相关产物的五个基因的序列。对每个翻译产物的三维结构进行了计算机模拟分析,以获取有关其潜在生化活性的信息。我们已经验证并进一步研究了可能参与抗止血作用的组装转录本,以提高我们对这组摄食分泌物的全面理解。所研究的蛋白质包括抑制初级止血的抑制剂,如含有 vWFA 结构域的蛋白质,以及靶向凝血级联不同步骤的化合物,例如 Turripeptide-like/蛋白酶抑制剂、TFPI-like 多种 Kunitz 型蛋白酶抑制剂、Meprin-like 金属蛋白酶和 Astacin/ShKT-like 结构域包含蛋白。所有这些分子都显示出有希望的药物开发潜力。

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