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核糖核酸酶T1与3'-鸟苷酸复合物在2.6埃分辨率下的三维结构。

Three-dimensional structure of the ribonuclease T1 X 3'-guanylic acid complex at 2.6 A resolution.

作者信息

Sugio S, Oka K, Ohishi H, Tomita K, Saenger W

出版信息

FEBS Lett. 1985 Apr 8;183(1):115-8. doi: 10.1016/0014-5793(85)80966-2.

Abstract

The mother enzyme of RNase T1 was co-crystallized with its natural product, 3'-GMP at pH 4.0. The X-ray structure of this complex was refined with 2432 reflections in the 5.4-2.6 A range using a stereochemical restrained method (conventional R = 27.4%). The overall polypeptide chain folding is very similar in the secondary structure elements to the RNase T1 in the complex with 2'-GMP crystallized also at pH 4.0, but larger conformational changes occur in the loop regions. The base recognition scheme is identical in both complexes but in RNase T1 X 3'-GMP, the ribose phosphate is not seen in the electron density, probably due to static disorder.

摘要

核糖核酸酶T1的母酶在pH 4.0条件下与它的天然产物3'-鸟苷酸共同结晶。使用立体化学限制方法,在5.4 - 2.6埃范围内用2432个反射对该复合物的X射线结构进行了精修(传统R值 = 27.4%)。在二级结构元件方面,整体多肽链折叠与同样在pH 4.0条件下结晶的与2'-鸟苷酸形成复合物的核糖核酸酶T1非常相似,但在环区发生了更大的构象变化。两种复合物中的碱基识别模式相同,但在核糖核酸酶T1 X 3'-鸟苷酸中,电子密度图中未观察到核糖磷酸,这可能是由于静态无序所致。

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