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基因靶向随机诱变以筛选裂殖酵母中破坏异染色质的蛋白酶体突变体

Gene-targeted Random Mutagenesis to Select Heterochromatin-destabilizing Proteasome Mutants in Fission Yeast.

作者信息

Seo Hogyu David, Lee Daeyoup

机构信息

Department of Biological Sciences, Korea Advanced Institute of Science and Technology;

Department of Biological Sciences, Korea Advanced Institute of Science and Technology.

出版信息

J Vis Exp. 2018 May 15(135):57499. doi: 10.3791/57499.

Abstract

Random mutagenesis of a target gene is commonly used to identify mutations that yield the desired phenotype. Of the methods that may be used to achieve random mutagenesis, error-prone PCR is a convenient and efficient strategy for generating a diverse pool of mutants (i.e., a mutant library). Error-prone PCR is the method of choice when a researcher seeks to mutate a pre-defined region, such as the coding region of a gene while leaving other genomic regions unaffected. After the mutant library is amplified by error-prone PCR, it must be cloned into a suitable plasmid. The size of the library generated by error-prone PCR is constrained by the efficiency of the cloning step. However, in the fission yeast, Schizosaccharomyces pombe, the cloning step can be replaced by the use of a highly efficient one-step fusion PCR to generate constructs for transformation. Mutants of desired phenotypes may then be selected using appropriate reporters. Here, we describe this strategy in detail, taking as an example, a reporter inserted at centromeric heterochromatin.

摘要

对目标基因进行随机诱变通常用于鉴定产生所需表型的突变。在可用于实现随机诱变的方法中,易错PCR是生成多样化突变体库(即突变文库)的便捷且高效的策略。当研究人员试图对预定义区域(如基因的编码区)进行诱变而不影响其他基因组区域时,易错PCR是首选方法。通过易错PCR扩增突变文库后,必须将其克隆到合适的质粒中。易错PCR产生的文库大小受克隆步骤效率的限制。然而,在裂殖酵母粟酒裂殖酵母中,克隆步骤可以用高效的一步融合PCR代替,以生成用于转化的构建体。然后可以使用合适的报告基因筛选具有所需表型的突变体。在此,我们以插入着丝粒异染色质的报告基因为例,详细描述该策略。

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本文引用的文献

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Random mutagenesis by PCR.通过聚合酶链式反应进行随机诱变。
Curr Protoc Mol Biol. 2001 May;Chapter 8:Unit8.3. doi: 10.1002/0471142727.mb0803s51.
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Heterochromatin revisited.异染色质再探讨。
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