Bioorganic Chemistry Laboratory, Department of Chemistry , Indian Institute of Technology Guwahati 781039 , India.
J Org Chem. 2018 Aug 3;83(15):7606-7621. doi: 10.1021/acs.joc.7b03097. Epub 2018 Jun 18.
Microenvironment-sensitive fluorescent nucleosides present attractive advantages over single-emitting dyes for sensing inter-biomolecular interactions involving DNA. Herein, we report the rational design and synthesis of triazolyl push-pull fluorophore-labeled uridines via the intermediacy of C5-[4-(2-propynyl(methyl)amino)]phenyl acetylene as a universal linker. The synthesized nucleosides showed interesting solvatochromic characteristic and/or intramolecular charge transfer (ICT) features. A few of them also exhibited dual-emitting characteristics evidencing our designing concept. The HOMO-LUMO distribution showed that the emissive states of these nucleosides were characterized with more significant electron redistribution between the C5-[4-(2-propynyl(methyl)amino)]phenyl triazolyl donor moiety and the aromatic chromophores linked to it, leading to modulated emission property. The solvent polarity sensitivity of these nucleosides was also tested. The synthesized triazolyl benzonitrile (10C), naphthyl (10E), and pyrenyl (10G) nucleosides were found to exhibit interesting ICT and dual (LE/ICT) emission properties. The dual-emitting pyrenyl nucleoside maintained a good ratiometric response in the BSA protein microenvironment, enabling the switch-on ratiometric sensing of BSA as the only protein biomolecule. Thus, it is expected that the new fluorescent nucleoside analogues would be useful in designing DNA probes for nucleic acid analysis or studying DNA-protein interactions via a drastic change in fluorescence response due to a change in micropolarity.
微环境敏感型荧光核苷相对于单发射染料在检测涉及 DNA 的生物分子间相互作用方面具有很大的优势。在此,我们通过 C5-[4-(2-丙炔基(甲基)氨基)]苯乙炔作为通用连接体,合理设计并合成了三唑基推拉荧光核苷标记的尿嘧啶。所合成的核苷具有有趣的溶剂变色特性和/或分子内电荷转移(ICT)特征。其中一些还表现出双发射特性,证明了我们的设计理念。HOMO-LUMO 分布表明,这些核苷的发光态特征是 C5-[4-(2-丙炔基(甲基)氨基)]苯三唑供体部分与连接到其上的芳基发色团之间的电子重新分布更加显著,从而导致发射性质得到调制。还测试了这些核苷的溶剂极性敏感性。发现合成的三唑基苯甲腈(10C)、萘基(10E)和并苯基(10G)核苷表现出有趣的 ICT 和双(LE/ICT)发射特性。双发射的并苯基核苷在 BSA 蛋白质微环境中保持良好的比率响应,能够作为唯一的蛋白质生物分子对 BSA 进行开比色感应。因此,预期新的荧光核苷类似物将有助于设计用于核酸分析的 DNA 探针,或通过荧光响应的剧烈变化(由于微极性的变化)研究 DNA-蛋白质相互作用。