• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

在体外重建过程中 50S 核糖体亚基形成和激活的结构可视化。

Structural Visualization of the Formation and Activation of the 50S Ribosomal Subunit during In Vitro Reconstitution.

机构信息

Institut für Medizinische Physik und Biophysik, Charité - Universitätsmedizin Berlin, corporate member of Freie Universität Berlin, Humboldt-Universität zu Berlin, and Berlin Institute of Health, Berlin, Germany.

UltraStrukturNetzwerk, Max Planck Institute for Molecular Genetics, Berlin, Germany.

出版信息

Mol Cell. 2018 Jun 7;70(5):881-893.e3. doi: 10.1016/j.molcel.2018.05.003.

DOI:10.1016/j.molcel.2018.05.003
PMID:29883607
Abstract

The assembly of ribosomal subunits is an essential prerequisite for protein biosynthesis in all domains of life. Although biochemical and biophysical approaches have advanced our understanding of ribosome assembly, our mechanistic comprehension of this process is still limited. Here, we perform an in vitro reconstitution of the Escherichia coli 50S ribosomal subunit. Late reconstitution products were subjected to high-resolution cryo-electron microscopy and multiparticle refinement analysis to reconstruct five distinct precursors of the 50S subunit with 4.3-3.8 Å resolution. These assembly intermediates define a progressive maturation pathway culminating in a late assembly particle, whose structure is more than 96% identical to a mature 50S subunit. Our structures monitor the formation and stabilization of structural elements in a nascent particle in unprecedented detail and identify the maturation of the rRNA-based peptidyl transferase center as the final critical step along the 50S assembly pathway.

摘要

核糖体亚基的组装是所有生命领域蛋白质生物合成的必要前提。尽管生化和生物物理方法已经提高了我们对核糖体组装的理解,但我们对这个过程的机制理解仍然有限。在这里,我们进行了大肠杆菌 50S 核糖体亚基的体外重构。对晚期重构产物进行高分辨率 cryo-电子显微镜和多颗粒精修分析,以重建 50S 亚基的五个不同的前体,分辨率为 4.3-3.8Å。这些组装中间体定义了一个渐进的成熟途径,最终形成一个晚期组装颗粒,其结构与成熟的 50S 亚基超过 96%相同。我们的结构以前所未有的细节监测新生颗粒中结构元素的形成和稳定,并确定基于 rRNA 的肽基转移酶中心的成熟是沿着 50S 组装途径的最后一个关键步骤。

相似文献

1
Structural Visualization of the Formation and Activation of the 50S Ribosomal Subunit during In Vitro Reconstitution.在体外重建过程中 50S 核糖体亚基形成和激活的结构可视化。
Mol Cell. 2018 Jun 7;70(5):881-893.e3. doi: 10.1016/j.molcel.2018.05.003.
2
Loss of a single methylation in 23S rRNA delays 50S assembly at multiple late stages and impairs translation initiation and elongation.23S rRNA 中单一位点的甲基化缺失会延迟 50S 组装的多个晚期阶段,并损害翻译起始和延伸。
Proc Natl Acad Sci U S A. 2020 Jul 7;117(27):15609-15619. doi: 10.1073/pnas.1914323117. Epub 2020 Jun 22.
3
The 3D arrangement of the 23 S and 5 S rRNA in the Escherichia coli 50 S ribosomal subunit based on a cryo-electron microscopic reconstruction at 7.5 A resolution.基于7.5埃分辨率的冷冻电子显微镜重建,大肠杆菌50S核糖体亚基中23S和5S rRNA的三维排列。
J Mol Biol. 2000 Apr 21;298(1):35-59. doi: 10.1006/jmbi.2000.3635.
4
Modular Assembly of the Bacterial Large Ribosomal Subunit.细菌大核糖体亚基的模块化组装
Cell. 2016 Dec 1;167(6):1610-1622.e15. doi: 10.1016/j.cell.2016.11.020.
5
The sarcin-ricin loop of 23S rRNA is essential for assembly of the functional core of the 50S ribosomal subunit.23S核糖体RNA的肌动蛋白-蓖麻毒素环对于50S核糖体亚基功能核心的组装至关重要。
RNA. 2008 Oct;14(10):1999-2012. doi: 10.1261/rna.1202108. Epub 2008 Aug 28.
6
Direct three-dimensional localization and positive identification of RNA helices within the ribosome by means of genetic tagging and cryo-electron microscopy.通过基因标记和冷冻电子显微镜对核糖体中的RNA螺旋进行直接三维定位和阳性鉴定。
Structure. 1999 Dec 15;7(12):1567-73. doi: 10.1016/s0969-2126(00)88347-1.
7
Single methylation of 23S rRNA triggers late steps of 50S ribosomal subunit assembly.23S核糖体RNA的单甲基化触发50S核糖体亚基组装的后期步骤。
Proc Natl Acad Sci U S A. 2015 Aug 25;112(34):E4707-16. doi: 10.1073/pnas.1506749112. Epub 2015 Aug 10.
8
Direct localization by cryo-electron microscopy of secondary structural elements in Escherichia coli 23 S rRNA which differ from the corresponding regions in Haloarcula marismortui.通过冷冻电子显微镜对大肠杆菌23 S rRNA中与嗜盐嗜碱菌相应区域不同的二级结构元件进行直接定位。
J Mol Biol. 2001 Apr 13;307(5):1341-9. doi: 10.1006/jmbi.2001.4547.
9
In vitro complementation analysis localizes 23S rRNA posttranscriptional modifications that are required for Escherichia coli 50S ribosomal subunit assembly and function.体外互补分析定位了大肠杆菌50S核糖体亚基组装和功能所需的23S rRNA转录后修饰。
RNA. 1996 Oct;2(10):1011-21.
10
Assessment of the nucleotide modifications in the high-resolution cryo-electron microscopy structure of the Escherichia coli 50S subunit.评估大肠杆菌 50S 亚基高分辨率冷冻电子显微镜结构中的核苷酸修饰。
Nucleic Acids Res. 2020 Mar 18;48(5):2723-2732. doi: 10.1093/nar/gkaa037.

引用本文的文献

1
Role of the sarcin-ricin loop of 23S rRNA in biogenesis of the 50S ribosomal subunit.23S核糖体RNA的肌动蛋白-蓖麻毒素环在50S核糖体亚基生物合成中的作用
RNA. 2025 Mar 18;31(4):585-599. doi: 10.1261/rna.080335.124.
2
The proline-rich antimicrobial peptide Api137 disrupts large ribosomal subunit assembly and induces misfolding.富含脯氨酸的抗菌肽Api137破坏大核糖体亚基组装并诱导错误折叠。
Nat Commun. 2025 Jan 10;16(1):567. doi: 10.1038/s41467-025-55836-8.
3
Autonomous ribosome biogenesis in vitro.体外自主核糖体生物合成
Nat Commun. 2025 Jan 8;16(1):514. doi: 10.1038/s41467-025-55853-7.
4
RNA language models predict mutations that improve RNA function.RNA语言模型可预测能改善RNA功能的突变。
Nat Commun. 2024 Dec 5;15(1):10627. doi: 10.1038/s41467-024-54812-y.
5
Chloramphenicol Interferes with 50S Ribosomal Subunit Maturation via Direct and Indirect Mechanisms.氯霉素通过直接和间接机制干扰 50S 核糖体亚基成熟。
Biomolecules. 2024 Sep 27;14(10):1225. doi: 10.3390/biom14101225.
6
Translational impacts of enzymes that modify ribosomal RNA around the peptidyl transferase centre.核糖体 RNA 转肽酶中心附近修饰酶的翻译影响。
RNA Biol. 2024 Jan;21(1):31-41. doi: 10.1080/15476286.2024.2368305. Epub 2024 Jul 1.
7
YjgA plays dual roles in enhancing PTC maturation.YjgA 在促进 PTC 成熟中发挥双重作用。
Nucleic Acids Res. 2024 Jul 22;52(13):7947-7960. doi: 10.1093/nar/gkae469.
8
RNA language models predict mutations that improve RNA function.RNA语言模型可预测能改善RNA功能的突变。
bioRxiv. 2024 Sep 16:2024.04.05.588317. doi: 10.1101/2024.04.05.588317.
9
Critical steps in the assembly process of the bacterial 50S ribosomal subunit.细菌 50S 核糖体亚基组装过程中的关键步骤。
Nucleic Acids Res. 2024 May 8;52(8):4111-4123. doi: 10.1093/nar/gkae199.
10
Late consolidation of rRNA structure during co-transcriptional assembly in by time-resolved DMS footprinting.通过时间分辨二甲基亚砜足迹法对共转录组装过程中rRNA结构的后期巩固。
bioRxiv. 2024 Jan 10:2024.01.10.574868. doi: 10.1101/2024.01.10.574868.