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Cdc45的晶体结构表明存在一种可能调节DNA复制的构象转换。

Crystal Structure of Cdc45 Suggests a Conformational Switch that May Regulate DNA Replication.

作者信息

Kurniawan Fredy, Shi Ke, Kurahashi Kayo, Bielinsky Anja-Katrin, Aihara Hideki

机构信息

Department of Biochemistry, Molecular Biology and Biophysics, University of Minnesota, Minneapolis, MN 55455, USA.

Department of Biochemistry, Molecular Biology and Biophysics, University of Minnesota, Minneapolis, MN 55455, USA.

出版信息

iScience. 2018 May 25;3:102-109. doi: 10.1016/j.isci.2018.04.011.

DOI:10.1016/j.isci.2018.04.011
PMID:29901028
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5994768/
Abstract

Cdc45 plays a critical role at the core of the eukaryotic DNA replisome, serving as an essential scaffolding component of the replicative helicase holoenzyme Cdc45-MCM-GINS (CMG) complex. A 1.66-Å-resolution crystal structure of the full-length Cdc45 protein from shows a protein fold similar to that observed previously for human Cdc45 in its active conformation, featuring the overall disk-like monomer shape and intimate contacts between the N- and C-terminal DHH domains. However, the Cdc45 structure shows several unique features, including a distinct orientation of the C-terminal DHHA1 domain, concomitant disordering of the adjacent protruding α-helical segment implicated in DNA polymerase ε interactions, and a unique conformation of the GINS/Mcm5-binding loop. These structural observations collectively suggest the possibility that Cdc45 can sample multiple conformations corresponding to different functional states. We propose that such conformational switch of Cdc45 may allow regulation of protein-protein interactions important in DNA replication.

摘要

Cdc45在真核生物DNA复制体的核心发挥着关键作用,作为复制解旋酶全酶Cdc45-MCM-GINS(CMG)复合物的重要支架成分。来自[具体来源未给出]的全长Cdc45蛋白的1.66埃分辨率晶体结构显示出一种与之前观察到的处于活性构象的人类Cdc45相似的蛋白折叠,其特征为整体呈盘状的单体形状以及N端和C端DHH结构域之间的紧密接触。然而,[具体物种未给出]的Cdc45结构显示出几个独特特征,包括C端DHHA1结构域的独特取向、与DNA聚合酶ε相互作用相关的相邻突出α螺旋片段的伴随无序,以及GINS/Mcm5结合环的独特构象。这些结构观察结果共同表明Cdc45可能具有对应不同功能状态的多种构象的可能性。我们提出Cdc45的这种构象转换可能允许对DNA复制中重要的蛋白质-蛋白质相互作用进行调控。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9882/6137338/2b6f8ee981e8/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9882/6137338/659e05c78dfa/fx1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9882/6137338/873490ace4b9/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9882/6137338/58ded54dd3ee/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9882/6137338/2b6f8ee981e8/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9882/6137338/659e05c78dfa/fx1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9882/6137338/873490ace4b9/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9882/6137338/58ded54dd3ee/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9882/6137338/2b6f8ee981e8/gr3.jpg

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本文引用的文献

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Proc Natl Acad Sci U S A. 2017 Apr 18;114(16):4141-4146. doi: 10.1073/pnas.1700530114. Epub 2017 Apr 3.
2
Cdc45-induced loading of human RPA onto single-stranded DNA.Cdc45诱导人源RPA加载到单链DNA上。
Nucleic Acids Res. 2017 Apr 7;45(6):3217-3230. doi: 10.1093/nar/gkw1364.
3
Structure of eukaryotic CMG helicase at a replication fork and implications to replisome architecture and origin initiation.
真核生物CMG解旋酶在复制叉处的结构及其对复制体结构和起始点引发的影响
Proc Natl Acad Sci U S A. 2017 Jan 31;114(5):E697-E706. doi: 10.1073/pnas.1620500114. Epub 2017 Jan 17.
4
Structural insights into Cdc45 function: was there a nuclease at the heart of the ancestral replisome?对Cdc45功能的结构见解:原始复制体的核心是否存在一种核酸酶?
Biophys Chem. 2017 Jun;225:10-14. doi: 10.1016/j.bpc.2016.11.011. Epub 2016 Nov 27.
5
Atomic structure of an archaeal GAN suggests its dual roles as an exonuclease in DNA repair and a CMG component in DNA replication.古菌 GAN 的原子结构表明其在 DNA 修复中作为核酸外切酶以及在 DNA 复制中作为 CMG 组件的双重作用。
Nucleic Acids Res. 2016 Nov 2;44(19):9505-9517. doi: 10.1093/nar/gkw789. Epub 2016 Sep 5.
6
Structure of human Cdc45 and implications for CMG helicase function.人 Cdc45 结构及其对 CMG 解旋酶功能的影响。
Nat Commun. 2016 May 18;7:11638. doi: 10.1038/ncomms11638.
7
Cryo-EM structures of the eukaryotic replicative helicase bound to a translocation substrate.与易位底物结合的真核复制解旋酶的冷冻电镜结构。
Nat Commun. 2016 Feb 18;7:10708. doi: 10.1038/ncomms10708.
8
Structure of the eukaryotic replicative CMG helicase suggests a pumpjack motion for translocation.真核生物复制型CMG解旋酶的结构表明其移位存在一种抽油机式运动。
Nat Struct Mol Biol. 2016 Mar;23(3):217-24. doi: 10.1038/nsmb.3170. Epub 2016 Feb 8.
9
The architecture of a eukaryotic replisome.真核生物复制体的结构。
Nat Struct Mol Biol. 2015 Dec;22(12):976-82. doi: 10.1038/nsmb.3113. Epub 2015 Nov 2.
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Cdc45 (cell division cycle protein 45) guards the gate of the Eukaryote Replisome helicase stabilizing leading strand engagement.Cdc45(细胞分裂周期蛋白45)守护着真核生物复制体解旋酶的大门,稳定前导链的结合。
Proc Natl Acad Sci U S A. 2015 Jan 20;112(3):E249-58. doi: 10.1073/pnas.1422003112. Epub 2015 Jan 5.