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Who's Who? Detecting and Resolving Sample Anomalies in Human DNA Sequencing Studies with Peddy.谁是谁?使用Peddy在人类DNA测序研究中检测和解决样本异常。
Am J Hum Genet. 2017 Mar 2;100(3):406-413. doi: 10.1016/j.ajhg.2017.01.017. Epub 2017 Feb 9.
2
Prevalence and architecture of de novo mutations in developmental disorders.发育障碍中新生突变的患病率及结构
Nature. 2017 Feb 23;542(7642):433-438. doi: 10.1038/nature21062. Epub 2017 Jan 25.
3
The 100 000 Genomes Project: What it means for paediatrics.“十万基因组计划”:对儿科意味着什么。
Arch Dis Child Educ Pract Ed. 2017 Apr;102(2):105-107. doi: 10.1136/archdischild-2016-311029. Epub 2016 Dec 9.
4
'Bolam' to 'Montgomery' is result of evolutionary change of medical practice towards 'patient-centred care'.从“博勒姆案”到“蒙哥马利案”是医疗实践向“以患者为中心的护理”演变的结果。
Postgrad Med J. 2017 Jan;93(1095):46-50. doi: 10.1136/postgradmedj-2016-134236. Epub 2016 Jul 27.
5
An old problem in a new age: Revisiting the clinical dilemma of misattributed paternity.新时代的老问题:重新审视父子关系误认的临床困境。
Appl Transl Genom. 2016 Feb 1;8:36-9. doi: 10.1016/j.atg.2016.01.004. eCollection 2016 Mar.
6
Clinical application of whole-exome sequencing across clinical indications.全外显子组测序在各种临床适应症中的临床应用。
Genet Med. 2016 Jul;18(7):696-704. doi: 10.1038/gim.2015.148. Epub 2015 Dec 3.
7
Exome and genome sequencing: a revolution for the discovery and diagnosis of monogenic disorders.外显子组和基因组测序:单基因疾病发现和诊断的革命。
J Intern Med. 2016 Jan;279(1):3-15. doi: 10.1111/joim.12399. Epub 2015 Aug 7.
8
Points to Consider: Ethical, Legal, and Psychosocial Implications of Genetic Testing in Children and Adolescents.需考虑的要点:儿童和青少年基因检测的伦理、法律及社会心理影响
Am J Hum Genet. 2015 Jul 2;97(1):6-21. doi: 10.1016/j.ajhg.2015.05.022.
9
Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology.序列变异解读的标准与指南:美国医学遗传学与基因组学学会和分子病理学协会的联合共识推荐
Genet Med. 2015 May;17(5):405-24. doi: 10.1038/gim.2015.30. Epub 2015 Mar 5.
10
When Should Genome Researchers Disclose Misattributed Parentage?基因组研究人员应在何时披露错误认定的亲子关系?
Hastings Cent Rep. 2015 Jul-Aug;45(4):28-36. doi: 10.1002/hast.452. Epub 2015 Feb 11.

当基因组医学揭示出错误归因的遗传关系时——重新审视披露的争论。

When genomic medicine reveals misattributed genetic relationships-the debate about disclosure revisited.

机构信息

Institute of Biomedical and Clinical Science, University of Exeter Medical School, Royal Devon and Exeter Hospital, Exeter, UK.

The Wellcome Centre for Ethics and Humanities/Ethox Centre, Nuffield Department of Population Health, University of Oxford, Oxford, UK.

出版信息

Genet Med. 2019 Jan;21(1):97-101. doi: 10.1038/s41436-018-0023-7. Epub 2018 Jun 14.

DOI:10.1038/s41436-018-0023-7
PMID:29904162
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6169736/
Abstract

PURPOSE

Accidental discovery of misattributed parentage is an age-old problem in clinical medicine, but the ability to detect it routinely has increased recently as a result of high-throughput DNA sequencing technologies coupled with family sequencing studies. Problems arise at the clinical-research boundary, where policies and consent forms guaranteeing nondisclosure may conflict with standard clinical care.

METHODS

To examine the challenges of managing misattributed parentage within hybrid translational research studies, we used a case study of a developmentally delayed child with a candidate variant found through a large-scale trio genome sequencing study in which data from unrelated samples were routinely excluded.

RESULTS

We discuss whether genetic parentage should be explicitly confirmed during clinical validation, thus giving greater weight to the diagnosis according to American College of Medical Genetics and Genomics variant interpretation guidelines, and what tensions this approach would create.

CONCLUSION

We recommend that the possibility of finding and disclosing misattributed parentage should be addressed during the consent or pretest counseling process, and that clinical relevance should determine whether or not to disclose results in the clinic. This proposition has implications for research governance, and implies that it may not always be possible to uphold nondisclosure commitments as investigations move from research to clinical care.

摘要

目的

在临床医学中,错误归因的亲子关系的偶然发现是一个由来已久的问题,但由于高通量 DNA 测序技术与家族测序研究的结合,常规检测这种关系的能力最近有所提高。在临床研究边界出现了问题,保障不披露的政策和同意书可能与标准的临床护理相冲突。

方法

为了研究在混合转化研究中管理错误归因亲子关系的挑战,我们使用了一个发育迟缓儿童的案例研究,该儿童通过一项大规模的三基因组测序研究发现了一个候选变异,而研究中常规排除了无关样本的数据。

结果

我们讨论了在临床验证过程中是否应该明确确认遗传亲子关系,从而根据美国医学遗传学与基因组学学院的变异解释指南更重视该诊断,以及这种方法会产生哪些紧张关系。

结论

我们建议在同意书或预测试咨询过程中应考虑发现和披露错误归因亲子关系的可能性,并根据临床相关性决定是否在诊所披露结果。这一主张对研究治理有影响,并意味着随着研究从研究转移到临床护理,可能并不总是能够坚持不披露的承诺。