Chu Dandan, Li Jing, Lin Hechun, Zhang Xiao, Pan Hongyu, Liu Lei, Yu Tao, Yan Mingxia, Yao Ming
State Key Laboratory of Oncogenes and Related Genes, Shanghai Cancer Institute, Renji Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai 200032, P.R. China.
Oncol Lett. 2018 Jun;15(6):9941-9952. doi: 10.3892/ol.2018.8581. Epub 2018 Apr 26.
MicroRNAs (miRs) are small non-coding RNAs that regulate gene expression and protein synthesis. Our previous study demonstrated that miR-148a suppressed the metastasis of non-small cell lung cancer (NSCLC) and . However, the modulatory mechanism of this effect remains unclear. In the present study, quantitative proteomic technology was used to study the protein expression profile of SPC-A-1 cells subsequent to the downregulation of miR-148a expression, in order to elucidate the molecular mechanism of the suppression of NSCLC metastasis by miR-148a. The differentially expressed proteins identified were analyzed using bioinformatics tools, including the Database for Annotation, Visualization and Integrated Discovery and the Search Tool for the Retrieval of Interacting Genes/proteins. In two experiments, 4,048 and 4,083 proteins were identified, and 4,014 and 4,039 proteins were quantified, respectively. In total, 44 proteins were upregulated and 40 proteins were downregulated. This was verified at the protein and mRNA levels by western blotting and reverse transcription-quantitative polymerase chain reaction, respectively. Bioinformatics analysis was used to identify potential interactions and signaling networks for the differentially expressed proteins. This may have provided an appropriate perspective for the comprehensive analysis of the modulatory mechanism underlying the metastasis-suppressive effects of miR-148a in NSCLC. In conclusion, quantitative proteomic technology revealed that miR-148a may regulate a panel of tumor-associated proteins to suppress metastasis in NSCLC.
微小RNA(miR)是一类调控基因表达和蛋白质合成的小型非编码RNA。我们之前的研究表明,miR-148a可抑制非小细胞肺癌(NSCLC)的转移。然而,这种作用的调节机制仍不清楚。在本研究中,采用定量蛋白质组学技术研究miR-148a表达下调后SPC-A-1细胞的蛋白质表达谱,以阐明miR-148a抑制NSCLC转移的分子机制。使用生物信息学工具,包括注释、可视化和综合发现数据库以及检索相互作用基因/蛋白质的搜索工具,对鉴定出的差异表达蛋白质进行分析。在两次实验中,分别鉴定出4048和4083种蛋白质,定量了4014和4039种蛋白质。总共44种蛋白质上调,40种蛋白质下调。分别通过蛋白质印迹法和逆转录-定量聚合酶链反应在蛋白质和mRNA水平对其进行了验证。利用生物信息学分析确定差异表达蛋白质的潜在相互作用和信号网络。这可能为全面分析miR-148a在NSCLC中抑制转移作用的调节机制提供了一个合适的视角。总之,定量蛋白质组学技术表明,miR-148a可能通过调节一组肿瘤相关蛋白来抑制NSCLC的转移。