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六种台湾蛇毒的蛋白质组学特征分析:鉴定种属特异性蛋白并建立眼镜蛇毒因子的 SISCAPA-MRM 检测方法。

Proteomic characterization of six Taiwanese snake venoms: Identification of species-specific proteins and development of a SISCAPA-MRM assay for cobra venom factors.

机构信息

Graduate Institute of Biomedical Sciences, College of Medicine, Chang Gung University, Taoyuan 333, Taiwan.

Department of Emergency Medicine, Chang Gung Memorial Hospital at Linkou, Taoyuan 333, Taiwan.

出版信息

J Proteomics. 2018 Sep 15;187:59-68. doi: 10.1016/j.jprot.2018.06.003. Epub 2018 Jun 19.

Abstract

UNLABELLED

Deinagkistrodon acutus, Trimeresurus stejnegeri, Protobothrops mucrosquamatus, Daboia russelii siamensis, Bungarus multicinctus and Naja atra are the six medically important venomous snake species in Taiwan. In this study, we characterized and compared their venom protein profiles using proteomic approaches. The major snake venom proteins were identified by GeLC-MS/MS and the total venom proteome was characterized by in-solution digestion coupled with LC-MS/MS. A total of 27-52 proteins, categorized into 23 protein families, were identified in each snake's venom. The major venom components found in Viperidae species (D. acutus, T. stejnegeri, P. mucrosquamatus and D. russelii) were C-type lectin, snake venom serine proteinase, venom metalloproteinase and phospholipase A, whereas three-finger toxin and phospholipase A were the major components detected in the venom of Elapidae snakes (B. multicinctus and N. atra). This study also provided the first demonstration of some low-abundance proteins in these six snake venoms, including 5'-nucleotidase, glutaminyl-peptide cyclotransferase and phosphodiesterase, among others. Furthermore, we found that cobra venom factor (CVF) is a cobra-specific protein. We produced anti-peptide antibodies against CVF and used it to develop a highly sensitive SISCAPA-MRM assay for quantifying CVF. The limit of detection and lower limit of quantification were 3.2 and 9.6 attomoles, respectively. This assay was used to precisely quantify CVF in 1 μg crude venom proteins from three Naja species and king cobra. The amount of CVF varied from 0.9 to 54.36 femtomoles (equivalent to 0.16-10.03 mg/g of venom protein).

BIOLOGICAL SIGNIFICANCE

There are six medically significant venomous snakes in Taiwan. The venoms of the four Viperidae species (Deinagkistrodon acutus, Trimeresurus stejnegeri, Protobothrops mucrosquamatus and Daboia russelii siamensis) cause local tissue swelling; this symptom is also seen in N. atra envenomation in humans, potentially complicating the differential diagnosis of envenomation by N. atra and Viperidae species. Thus, characterization of the venom proteomes of the six Taiwanese snakes, including the relative abundance of the major components and species-specific protein(s) in each venom type, could be useful for future venom research, including the development of new assay(s) for detecting snake species-specific venom protein(s) and new type(s) of antivenom.

摘要

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尖吻蝮、烙铁头、原矛头蝮、圆斑蝰、银环蛇和金环蛇是台湾六种具有重要医学意义的毒蛇。在这项研究中,我们使用蛋白质组学方法对它们的毒液蛋白图谱进行了表征和比较。通过 GeLC-MS/MS 鉴定了主要的蛇毒蛋白,并通过液相色谱-串联质谱法(LC-MS/MS)结合溶液消化对总毒液蛋白质组进行了表征。每种蛇毒中都鉴定出 27-52 种蛋白,分为 23 种蛋白家族。在蝰科(尖吻蝮、烙铁头、原矛头蝮和圆斑蝰)蛇毒中发现的主要毒液成分是 C 型凝集素、蛇毒丝氨酸蛋白酶、金属蛋白酶和磷脂酶 A,而三指毒素和磷脂酶 A 是 Elapidae 蛇毒(银环蛇和金环蛇)中的主要成分。本研究还首次证明了这六种蛇毒中存在一些低丰度蛋白,包括 5'-核苷酸酶、谷氨酰胺肽环转移酶和磷酸二酯酶等。此外,我们发现 cobra venom factor (CVF) 是一种眼镜蛇特有的蛋白。我们制备了针对 CVF 的肽抗体,并利用它开发了一种高灵敏度的 SISCAPA-MRM 测定法来定量检测 CVF。检测限和定量下限分别为 3.2 和 9.6 飞摩尔,分别。该测定法用于精确定量三种眼镜蛇和眼镜王蛇 1μg 粗毒液蛋白中的 CVF。CVF 的量从 0.9 到 54.36 飞摩尔(相当于 0.16-10.03mg/g 毒液蛋白)不等。

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