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DNA限制性片段的高效液相色谱法

High-performance liquid chromatography of DNA restriction fragments.

作者信息

Hecker R, Colpan M, Riesner D

出版信息

J Chromatogr. 1985 Jun 19;326:251-61. doi: 10.1016/s0021-9673(01)87451-3.

DOI:10.1016/s0021-9673(01)87451-3
PMID:2993329
Abstract

High-performance liquid chromatography on Nucleogen-DEAE 4000-10 has been applied to several problems of the isolation of DNA restriction fragments. Large amounts of DNA fragments of high purity are necessary for biophysical studies and for molecular hybridization in basic research, as well as in medical diagnosis. The influence of various parameters, such as buffer, pH, eluting salt, gradient slope, flow-rate and the addition of urea on the resolution of fragments by high-performance liquid chromatography were studied on an analytical scale, and the optimal conditions were then used for the large-scale preparation of milligram amounts. The best resolution of fragments between 25 and 1500 base pairs was obtained with a linear gradient from 500 mM to 1200 mM sodium chloride in 6 M urea -30 mM sodium phosphate (pH 6.0). Quantitative data are given for the purity and recovery of the sample, and the capacity and lifetime of the column. The following applications of high-performance liquid chromatography of restriction fragments are described: preparation of 2 mg of fragments, separation of 1 mg of DNA insert from 7 mg of its plasmid vector, and analysis of DNA-RNA hybrids.

摘要

利用Nucleogen-DEAE 4000-10进行高效液相色谱分析已应用于DNA限制性片段分离的若干问题。在基础研究以及医学诊断中,生物物理研究和分子杂交需要大量高纯度的DNA片段。在分析规模上研究了各种参数(如缓冲液、pH值、洗脱盐、梯度斜率、流速和尿素添加量)对高效液相色谱分离片段分辨率的影响,然后将最佳条件用于毫克量的大规模制备。在6M尿素-30mM磷酸钠(pH 6.0)中,采用500mM至1200mM氯化钠的线性梯度,可获得25至1500个碱基对片段的最佳分辨率。给出了样品纯度、回收率、柱容量和使用寿命的定量数据。本文还描述了限制性片段高效液相色谱的以下应用:制备2mg片段、从7mg质粒载体中分离1mg DNA插入片段以及分析DNA-RNA杂交体。

相似文献

1
High-performance liquid chromatography of DNA restriction fragments.DNA限制性片段的高效液相色谱法
J Chromatogr. 1985 Jun 19;326:251-61. doi: 10.1016/s0021-9673(01)87451-3.
2
Separation of DNA restriction fragments by ion-exchange chromatography on FPLC columns Mono P and Mono Q.通过在FPLC柱Mono P和Mono Q上进行离子交换色谱法分离DNA限制性片段。
Anal Biochem. 1987 Oct;166(1):158-71. doi: 10.1016/0003-2697(87)90558-6.
3
Anion-exchange chromatography of DNA restriction fragments.DNA限制片段的阴离子交换色谱法。
J Chromatogr. 1991 Aug 30;555(1-2):109-24. doi: 10.1016/s0021-9673(01)87171-5.
4
Analysis and purification of DNA restriction fragments by high-performance liquid chromatography.通过高效液相色谱法分析和纯化DNA限制性片段
J Chromatogr. 1991 Jul 12;548(1-2):281-7. doi: 10.1016/s0021-9673(01)88609-x.
5
High resolution preparative gel electrophoresis of DNA fragments and plasmid DNA using a continuous elution apparatus.使用连续洗脱装置对DNA片段和质粒DNA进行高分辨率制备凝胶电泳。
Anal Biochem. 1986 Dec;159(2):280-6. doi: 10.1016/0003-2697(86)90344-1.
6
Large-scale purification of plasmid DNA by anion-exchange high-performance liquid chromatography.通过阴离子交换高效液相色谱法大规模纯化质粒DNA
Biotechniques. 1992 Mar;12(3):430-4.
7
Purification of supercoiled plasmids from crude cell lysates using high performance anion exchange chromatography.使用高效阴离子交换色谱法从粗细胞裂解物中纯化超螺旋质粒。
Biotechniques. 1989 Jan;7(1):60-7.
8
Fractionation of DNA restriction fragments with ion-exchangers for high-performance liquid chromatography.用离子交换剂对DNA限制性片段进行分级分离用于高效液相色谱分析。
Eur J Biochem. 1986 Feb 17;155(1):203-12. doi: 10.1111/j.1432-1033.1986.tb09478.x.
9
Preparation of DNA topoisomers by RP-18 high-performance liquid chromatography.通过RP-18高效液相色谱法制备DNA拓扑异构体。
Anal Biochem. 1992 Nov 1;206(2):293-9. doi: 10.1016/0003-2697(92)90369-i.
10
Preparation and characterization of large amounts of restriction fragments containing the E. coli lac control elements.大量含有大肠杆菌乳糖操纵子控制元件的限制性片段的制备与表征。
Gene. 1979 Sep;7(1):1-14. doi: 10.1016/0378-1119(79)90039-8.

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Curved DNA fragments display retarded elution upon anion exchange HPLC.弯曲的DNA片段在阴离子交换高效液相色谱中表现出洗脱延迟。
Nucleic Acids Res. 1991 Aug 11;19(15):4181-8. doi: 10.1093/nar/19.15.4181.