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采用集成生物信息学辅助方法鉴定具有抑制α-淀粉酶和血管紧张素转化酶(ACE)活性的平托豆肽。

Identification of Pinto bean peptides with inhibitory effects on α-amylase and angiotensin converting enzyme (ACE) activities using an integrated bioinformatics-assisted approach.

机构信息

Analytical Biochemistry Research Centre, Universiti Sains Malaysia, 11800 Penang, Malaysia.

Analytical Biochemistry Research Centre, Universiti Sains Malaysia, 11800 Penang, Malaysia.

出版信息

Food Chem. 2018 Nov 30;267:124-131. doi: 10.1016/j.foodchem.2017.04.166. Epub 2017 Apr 27.

Abstract

Five Pinto bean peptides with α-amylase and angiotensin converting enzyme (ACE) inhibitory activities were successfully identified using the integrated bioinformatics approach. By using PEAKS studio, 511 peptide sequences were first shortlisted based on their de novo sequence property and average local confidence (ALC) yield of ≥60%. Subsequently, only five peptides were found to have high potential (score ≥0.80) for contributing bioactivy. The important sites which were potentially bound by the peptides: (a) Trp58, Trp59, Tyr 62, Asp96, Arg195, Asp197, Glu233, His299, Asp300 and His305 for α-amylase; (b) His353, Ala354, His383, Glu384, His387, Glu411, Lys511, His513, Tyr520 and Tyr523 for ACE had corresponded to the catalytic and substrate binding sites of the two enzymes. A validation assay was then conducted and IC values were determined. The range of the values for α-amylase inhibitory activity was 10.03-23.33mM, whereas the values for ACE inhibitory activity were of 1.52-31.88μM.

摘要

采用整合生物信息学方法,成功鉴定出具有α-淀粉酶和血管紧张素转化酶(ACE)抑制活性的五PINTO 豆肽。使用 PEAKS studio,首先根据从头序列特性和平均局部置信度(ALC)产量≥60%,将 511 个肽序列初筛出来。随后,仅发现五个肽具有高潜在活性(评分≥0.80)。这些肽可能结合的重要位点为:(a)α-淀粉酶的 Trp58、Trp59、Tyr62、Asp96、Arg195、Asp197、Glu233、His299、Asp300 和 His305;(b)ACE 的 His353、Ala354、His383、Glu384、His387、Glu411、Lys511、His513、Tyr520 和 Tyr523,这些位点对应于两种酶的催化和底物结合位点。然后进行验证试验并确定 IC 值。α-淀粉酶抑制活性的范围为 10.03-23.33mM,而 ACE 抑制活性的范围为 1.52-31.88μM。

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