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[荧光杂交(FISH)定量处理的优化]

[Optimization for Quantitative Processing of Fluorescence Hybridization (FISH)].

作者信息

Wang Run-Fang, Zhang Hong, Wang Qin, Wang Juan, Gu Jian, Qi Rong, Yang Min

机构信息

Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China.

Water Quality Testing Center, Beijing Drainage Water Environment Development Co., Ltd., Beijing 100022, China.

出版信息

Huan Jing Ke Xue. 2016 Jun 8;37(6):2266-2270. doi: 10.13227/j.hjkx.2016.06.033.

Abstract

Precise quantification of , which is identified as a dominated filamentous bacterium of bulking sludge in the worldwide, is essential for bulking investigation and related control strategies. However, quantitative processing based on fluorescence hybridization (FISH) is prone to interference due to the specific characteristics of (hydrophobic surface with thick cell wall). Our study focused on pretreatment and process optimization to show that the proportion of was increased from 1.12% to 96.70% benefited by lysozyme (36000 U·mL), high probe concentration (4.5 ng·μL) and longer hybridization time (4 h) employed, mapping with the results of q-PCR method and Eikelboom & Jenkins Observation.

摘要

在全球范围内,被确定为膨胀污泥中占主导地位的丝状细菌,对其进行精确量化对于膨胀调查及相关控制策略至关重要。然而,基于荧光原位杂交(FISH)的定量处理,由于该细菌(具有厚细胞壁的疏水表面)的特殊特性,容易受到干扰。我们的研究聚焦于预处理和工艺优化,结果表明,通过使用溶菌酶(36000 U·mL)、高探针浓度(4.5 ng·μL)和更长的杂交时间(4小时),该细菌的比例从1.12%增加到了96.70%,与定量聚合酶链反应(q-PCR)方法和艾克尔布姆与詹金斯观察结果相符。

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