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免疫相关基因在 RAW264.7 巨噬细胞细胞对 感染的上调反应。

Upregulation of Immune Process-Associated Genes in RAW264.7 Macrophage Cells in Response to Infection.

机构信息

College of Animal Science and Technology, College of Tropical Agriculture and Forestry, Hainan University, Hainan Key Lab of Tropical Animal Reproduction & Breeding and Epidemic Disease Research, Haidian Island, Haikou 570228, China.

出版信息

Biomed Res Int. 2018 Jun 4;2018:1235097. doi: 10.1155/2018/1235097. eCollection 2018.

Abstract

Melioidosis is a severe and fatal tropical zoonosis, which is triggered by . To better understand the host's response to infection of , an RNA-Seq technology was used to confirm differentially expressed genes (DEGs) in RAW264.7 cells infected with . In total, 4668 DEGs were identified across three time points (4, 8, and 11 hours after infection). Short Time-Series Expression Miner (STEM) analysis revealed the temporal gene expression profiles and identified seven significant patterns in a total of 26 profiles. Kyoto Encyclopedia of Genes and Genomes (KEGG) was utilized to confirm significantly enriched immune process-associated pathways, and 10 DEGs, including and , were mapped to eight immune process-associated pathways. Subsequent quantitative real-time PCR assays confirmed that the 10 DEGs were all upregulated during infection. Overall, the results showed that infection can initiate a time-series upregulation of immune process-associated DEGs in RAW264.7 macrophage cells. The discovery of this article helps us better understand the biological function of the immune process-associated genes during infection and may aid in the development of prophylaxis and treatment protocols for melioidosis.

摘要

类鼻疽是一种严重且致命的热带人畜共患病,由 引发。为了更好地了解宿主对 的感染反应,本研究采用 RNA-Seq 技术来确认 RAW264.7 细胞感染 后差异表达基因(DEGs)。在三个时间点(感染后 4、8 和 11 小时)共鉴定出 4668 个 DEGs。短时间序列表达 Miner(STEM)分析揭示了基因表达的时间图谱,并在总共 26 个图谱中确定了 7 个显著模式。京都基因与基因组百科全书(KEGG)用于确认显著富集的免疫过程相关途径,并且 10 个 DEGs,包括 和 ,映射到 8 个免疫过程相关途径。随后的定量实时 PCR 检测证实,在感染过程中这 10 个 DEGs 均上调。总的来说,结果表明 感染可引发 RAW264.7 巨噬细胞中免疫过程相关 DEGs 的时间序列上调。本文的发现有助于我们更好地了解感染期间免疫过程相关基因的生物学功能,并可能有助于制定类鼻疽病的预防和治疗方案。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/87b0/6008862/81dbe15d9710/BMRI2018-1235097.001.jpg

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