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利用靶向外显子组测序对韩国斯塔加特病患者的临床和遗传特征分析

Clinical and Genetic Characteristics Analysis of Korean Patients with Stargardt Disease Using Targeted Exome Sequencing.

作者信息

Sung Youngje, Choi Seung Woo, Shim Sung Han, Song Won Kyung

机构信息

Department of Ophthalmology, CHA Bundang Medical Center, CHA University College of Medicine, Seongnam, Republic of Korea.

Department of Health Sciences and Technology, Samsung Advanced Institute for Health Sciences and Technology, Sungkyunkwan University, Suwon, Republic of Korea.

出版信息

Ophthalmologica. 2019;241(1):38-48. doi: 10.1159/000490073. Epub 2018 Jul 4.

Abstract

PURPOSE

To investigate genetic mutations in Korean patients with Stargardt disease (STGD) using exome sequencing, and to analyze the correlations between genetic mutations and clinical phenotypes.

METHODS

Peripheral venous blood was obtained from 24 clinically diagnosed Korean STGD patients, followed by extraction of genomic DNAs. Using exome sequencing we investigated gene mutations for the adenosine triphosphate-binding cassette, subfamily A, member 4 (ABCA4) elongation of very-long-chain fatty acids 4 (ELOVL4), and prominin 1 (PROM1), and confirmed gene mutations by the direct sequencing of polymerase chain reaction products.

RESULTS

ABCA4 mutations were confirmed in 17 of 24 patients, and 12 novel mutations were identified. ELOVL4 and PROM1 gene mutations were not identified in this study. We also identified 16 previously reported mutations related to STGD1. In patients whose disease symptoms occurred before 20 years of age, visual acuity was poorer and atrophic flecks were more frequently found. In addition, more ABCA4 mutations were found in patients who had choroidal silence or atrophic flecks.

CONCLUSIONS

Novel ABCA4 gene mutations were found in Korean patients with STGD1. This study will facilitate better understanding of the relationships between ABCA4 gene mutations and clinical symptoms in Korean patients.

摘要

目的

利用外显子组测序研究韩国斯塔加特病(STGD)患者的基因突变情况,并分析基因突变与临床表型之间的相关性。

方法

从24例临床诊断为韩国STGD患者中采集外周静脉血,随后提取基因组DNA。利用外显子组测序研究三磷酸腺苷结合盒亚家族A成员4(ABCA4)、极长链脂肪酸延长蛋白4(ELOVL4)和prominin 1(PROM1)的基因突变情况,并通过聚合酶链反应产物的直接测序确认基因突变。

结果

24例患者中有17例确认存在ABCA4突变,共鉴定出12个新突变。本研究未发现ELOVL4和PROM1基因突变。我们还鉴定出16个先前报道的与STGD1相关的突变。在疾病症状出现在20岁之前的患者中,视力较差,萎缩性斑点更常见。此外,在有脉络膜暗区或萎缩性斑点的患者中发现更多的ABCA4突变。

结论

在韩国STGD1患者中发现了新的ABCA4基因突变。本研究将有助于更好地理解韩国患者中ABCA4基因突变与临床症状之间的关系。

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