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系统 p53 突变文库将功能差异与癌症突变模式和进化保守性联系起来。

A Systematic p53 Mutation Library Links Differential Functional Impact to Cancer Mutation Pattern and Evolutionary Conservation.

机构信息

Department of Molecular Cell Biology, Weizmann Institute of Science, Rehovot 7610001, Israel; Department of Computer Science and Applied Mathematics, Weizmann Institute of Science, Rehovot 7610001, Israel.

Department of Molecular Cell Biology, Weizmann Institute of Science, Rehovot 7610001, Israel.

出版信息

Mol Cell. 2018 Jul 5;71(1):178-190.e8. doi: 10.1016/j.molcel.2018.06.012.

Abstract

The TP53 gene is frequently mutated in human cancer. Research has focused predominantly on six major "hotspot" codons, which account for only ∼30% of cancer-associated p53 mutations. To comprehensively characterize the consequences of the p53 mutation spectrum, we created a synthetically designed library and measured the functional impact of ∼10,000 DNA-binding domain (DBD) p53 variants in human cells in culture and in vivo. Our results highlight the differential outcome of distinct p53 mutations in human patients and elucidate the selective pressure driving p53 conservation throughout evolution. Furthermore, while loss of anti-proliferative functionality largely correlates with the occurrence of cancer-associated p53 mutations, we observe that selective gain-of-function may further favor particular mutants in vivo. Finally, when combined with additional acquired p53 mutations, seemingly neutral TP53 SNPs may modulate phenotypic outcome and, presumably, tumor progression.

摘要

TP53 基因在人类癌症中经常发生突变。研究主要集中在六个主要的“热点”密码子上,它们仅占癌症相关 p53 突变的约 30%。为了全面描述 p53 突变谱的后果,我们创建了一个合成设计的文库,并在培养的人类细胞中和体内测量了约 10000 个 DNA 结合域 (DBD) p53 变体的功能影响。我们的结果突出了不同 p53 突变在人类患者中的不同结果,并阐明了在整个进化过程中驱动 p53 保守性的选择压力。此外,虽然抗增殖功能的丧失在很大程度上与癌症相关的 p53 突变的发生相关,但我们观察到选择性获得功能可能进一步有利于体内特定的突变体。最后,当与其他获得的 p53 突变结合时,看似中性的 TP53 SNPs 可能会调节表型结果,并且可能会调节肿瘤的进展。

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