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剪接异质性:从信号中分离噪声。

Splicing heterogeneity: separating signal from noise.

机构信息

Laboratory of Receptor Biology and Gene Expression, Center for Cancer Research, National Cancer Institute, Bethesda, MD, 20892, USA.

出版信息

Genome Biol. 2018 Jul 9;19(1):86. doi: 10.1186/s13059-018-1467-4.

Abstract

Single-cell analyses have revealed a tremendous variety among cells in the abundance and chemical composition of RNA. Much of this heterogeneity is due to alternative splicing by the spliceosome. Little is known about how many of the resulting isoforms are biologically functional or just provide noise with little to no impact. The dynamic nature of the spliceosome provides numerous opportunities for regulation but is also the source of stochastic fluctuations. We discuss possible origins of splicing stochasticity, the experimental approaches for studying heterogeneity in isoforms, and the potential biological significance of noisy splicing in development and disease.

摘要

单细胞分析揭示了细胞之间在 RNA 的丰度和化学组成上存在巨大差异。这种异质性很大程度上是由于剪接体的选择性剪接所致。对于有多少产生的异构体具有生物学功能,或者只是提供几乎没有影响的噪声,人们知之甚少。剪接体的动态性质提供了许多调节的机会,但也是随机波动的来源。我们讨论了剪接随机性的可能起源,研究异构体异质性的实验方法,以及在发育和疾病中嘈杂剪接的潜在生物学意义。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0a81/6036703/9a3edb418e81/13059_2018_1467_Fig1_HTML.jpg

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