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腐朽挪威云杉的细菌群落沿明显的坡面暴露和时间相关的轨迹发展。

Bacterial communities of decaying Norway spruce follow distinct slope exposure and time-dependent trajectories.

机构信息

Institute of Microbiology, University of Innsbruck, Innsbruck, Austria.

Departamento de Ecología y Biología Animal, Universidad de Vigo, Vigo, Spain.

出版信息

Environ Microbiol. 2018 Oct;20(10):3657-3670. doi: 10.1111/1462-2920.14359. Epub 2018 Aug 16.

DOI:10.1111/1462-2920.14359
PMID:30003645
Abstract

Deadwood decay employs a complex metabolism and provides carbon and nutrients for soils. Although being highly diverse, the contribution of the bacterial deadwood colonizing community is underexplored compared with the fungal one. Therefore, we performed an in-field mesocosm study and monitored the bacterial communities in decaying experimental Picea abies wood blocks and their underlying soil on north- and south- exposed slopes in the Italian Alps over a 2-year period. The faster deadwood decay at the south-facing slope was associated with a higher bacterial richness and a higher number of specialist operational taxonomic units (OTUs) which were more strongly correlated to environmental parameters than other bacterial community members. With progressing decay, the wood and soil bacterial communities became more similar in terms of richness, diversity and evenness and especially at the south-facing slope, they also became more similar in terms of community composition. Exposure-specific OTUs suggest wood-soil interaction. However, despite the strong influence of exposure on the soil bacterial communities, the P. abies wood blocks shared a comparably high number of OTUs with the soil irrespective of the slope. At finer taxonomic scale, we identified Pseudomonas, Microbacteria, Sphingomonas, Xanthomonas, Methylovirgula and Burkholderia as decay associated, although their functional role needs further studies.

摘要

枯木腐朽利用了复杂的新陈代谢,并为土壤提供了碳和养分。尽管高度多样化,但与真菌相比,细菌对定殖社区的贡献仍未得到充分探索。因此,我们进行了一项野外中尺度研究,监测了意大利阿尔卑斯山北坡和南坡上 2 年内实验性云杉枯木块腐烂过程中细菌群落及其下土壤的细菌群落。南坡枯木腐朽速度较快,与细菌丰富度较高和更多的专业分类操作单元(OTU)有关,这些 OTU 与环境参数的相关性强于其他细菌群落成员。随着腐朽的进行,木材和土壤细菌群落在丰富度、多样性和均匀度方面变得更加相似,特别是在南坡,它们在群落组成方面也变得更加相似。特定于暴露的 OTU 表明了木材-土壤的相互作用。然而,尽管暴露对土壤细菌群落有很强的影响,但无论坡度如何,云杉枯木块与土壤都有相当数量的 OTU 共享。在更精细的分类学尺度上,我们确定了 Pseudomonas、Microbacteria、Sphingomonas、Xanthomonas、Methylovirgula 和 Burkholderia 与腐朽有关,尽管它们的功能作用需要进一步研究。

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